RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KLHL34Q8N239 644 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 FBXW7Q969H0 707 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 LRRC2Q9BYS8 371 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 AGXT2Q9BYV1 514 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 NAPBQ9H115 298 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 SPON1Q9HCB6 807 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 GPHNQ9NQX3 736 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 ANAPC4Q9UJX5 808 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 TPCN1Q9ULQ1 816 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 SUGT1Q9Y2Z0 365 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L3A6NCW0 530 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L4A6NCW7 530 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 IARSP41252 1262 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 TDO2P48775 406 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 MCM2P49736 904 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 SCNN1DP51172 638 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 RASSF7Q02833 373 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 PPARAQ07869 468 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 ME3Q16798 604 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 SOGA3Q5TF21 947 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 GIMAP6Q6P9H5 292 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 CYB5R4Q7L1T6 521 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 DHX32Q7L7V1 743 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L1Q7RTZ2 530 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 STAG1Q8WVM7 1258 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 GMLQ99445 158 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 TAOK3Q9H2K8 898 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 ROBO3Q96MS0 1386 aa8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-203ENST00000503464 B4E1Z4 1266 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L12C9JPN9 530 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L21D6R901 530 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 G3V3G9 751 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 DTNBO60941 627 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 WDHD1O75717 1129 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 LDHCP07864 332 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 FGRP09769 529 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 SBK1Q52WX2 424 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 AKNAD1Q5T1N1 836 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 DCAF8Q5TAQ9 597 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 APOBEC3HQ6NTF7 200 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 Q6ZUG5 572 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 FBXL16Q8N461 479 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 NACAP1Q9BZK3 213 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 FHDC1Q9C0D6 1143 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 VPS33BQ9H267 617 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 ATP8A2Q9NTI2 1148 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 LIMCH1Q9UPQ0 1083 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 BCS1LQ9Y276 419 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 FLT1P17948 1338 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 WDR19Q8NEZ3 1342 aa8.18□□□□□ -1.1
TOPBP1-203ENST00000503464 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 PSMD14O00487 310 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 PRC1O43663 620 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 RAD17O75943 681 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 BAG3O95817 575 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 HMGB1P09429 215 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 CRKP46108 304 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 EVCP57679 992 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 SLC4A8Q2Y0W8 1093 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 C12orf60Q5U649 245 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 CDC42EP5Q6NZY7 148 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 HHIPL2Q6UWX4 724 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 MAPKAPK5Q8IW41 473 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 TEX11Q8IYF3 940 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 NECAB1Q8N987 351 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 TGFBRAP1Q8WUH2 860 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 BRF1Q92994 677 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 ZDHHC15Q96MV8 337 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 DDX4Q9NQI0 724 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 ARPP21Q9UBL0 812 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 DAXXQ9UER7 740 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 BRPF3Q9ULD4 1205 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
TOPBP1-203ENST00000503464 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 SH2B2O14492 632 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 KDM4AO75164 1064 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 MCM5P33992 734 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 PLCD1P51178 756 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 HDLBPQ00341 1268 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 CXCL9Q07325 125 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 NFIAQ12857 509 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 PKP1Q13835 747 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 CCDC83Q8IWF9 413 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 NIM1KQ8IY84 436 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms