RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 TNNI2P48788 182 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 ZNF75DP51815 510 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 BEND3Q5T5X7 828 aa18.21■□□□□ 0.5
HMGXB3-202ENST00000503427 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.5
HMGXB3-202ENST00000503427 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 STAMBPO95630 424 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 MNAT1P51948 309 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 SH2D4AQ9H788 454 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 DEXIO95424 95 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 PPP2R5BQ15173 497 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 SPATA5Q8NB90 893 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 ATRIPQ8WXE1 791 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 STMN4Q9H169 189 aaPredicted RBP18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 CBX8Q9HC52 389 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 B4DLN1 442 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 MRPL12P52815 198 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 KCNH3Q9ULD8 1083 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 BRD1O95696 1058 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 VAV2P52735 878 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 CAPZA3Q96KX2 299 aa18.2■□□□□ 0.5
HMGXB3-202ENST00000503427 CTSWP56202 376 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 BICD1Q96G01 975 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 CCDC77Q9BR77 488 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 IMPACTQ9P2X3 320 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 NF2P35240 595 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 TRIM14Q14142 442 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 TSGA10Q9BZW7 698 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 VPS18Q9P253 973 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 IKBKGQ9Y6K9 419 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 RHOXF2BP0C7M4 288 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 EVCP57679 992 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 HDXQ7Z353 690 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 NBPF11Q86T75 865 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 RHOXF2Q9BQY4 288 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
HMGXB3-202ENST00000503427 TAF5LO75529 589 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 FAM173BQ6P4H8 233 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 ARFGAP2Q8N6H7 521 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 ERCC6L2Q5T890 1561 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 ZKSCAN3Q9BRR0 538 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 CUTAO60888 179 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 ARID5AQ03989 594 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 A0A1W2PRG0 241 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 EBAG9O00559 213 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 CCDC122Q5T0U0 273 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 MYRIPQ8NFW9 859 aa18.18■□□□□ 0.5
HMGXB3-202ENST00000503427 PLCD1P51178 756 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 IGSF22Q8N9C0 903 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 ZFP91Q96JP5 570 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 FERMT1Q9BQL6 677 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 GADD45BO75293 160 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 ZAP70P43403 619 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 FANCCQ00597 558 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 BAG6P46379 1132 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 C6orf163Q5TEZ5 329 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 MLKLQ8NB16 471 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 TBC1D22AQ8WUA7 517 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
HMGXB3-202ENST00000503427 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 TTF2Q9UNY4 1162 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 ZNF174Q15697 407 aa18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 TNNC1P63316 161 aa18.16■□□□□ 0.5
HMGXB3-202ENST00000503427 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 KIF4AO95239 1232 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 TMEM63CQ9P1W3 806 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 H0YIN7 160 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 ATP2C2O75185 946 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 NLRP12P59046 1061 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 TTLL7Q6ZT98 887 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 SMAP1Q8IYB5 467 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 SUPT20HQ8NEM7 779 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 GLT8D2Q9H1C3 349 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 ANKS4BQ8N8V4 417 aa18.15■□□□□ 0.5
HMGXB3-202ENST00000503427 SV2BQ7L1I2 683 aa18.14■□□□□ 0.5
HMGXB3-202ENST00000503427 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms