RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 KIF1BO60333 1816 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 CCDC151A5D8V7 595 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 SRGAP1Q7Z6B7 1085 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 DSCC1Q9BVC3 393 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 STMN4Q9H169 189 aaPredicted RBP19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 RCOR1Q9UKL0 485 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 A0A0D9SFI3 127 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 MACROD2A1Z1Q3 448 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 IKBKBO14920 756 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 ATP5JP18859 108 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 JAKMIP2Q96AA8 810 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 DBNDD2Q9BQY9 259 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 ANKRD62A6NC57 917 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
HMGXB3-201ENST00000502717 GSTTP1A0A1W2PQM5 241 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 CETN2P41208 172 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 DDB1Q16531 1140 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 C8orf74Q6P047 294 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 PNOCQ13519 176 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 CTNND2Q9UQB3 1225 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 RXRAP19793 462 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 KRT40Q6A162 431 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 TRMT112Q9UI30 125 aaKnown RBP19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 CDC23Q9UJX2 597 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 NDUFA8P51970 172 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
HMGXB3-201ENST00000502717 ANKRD7Q92527 254 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 DESI2Q9BSY9 194 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 LTKP29376 864 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 PLA2G4DQ86XP0 818 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 SPAG5Q96R06 1193 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 IFIT1BQ5T764 474 aaKnown RBP19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 IFT20Q8IY31 132 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 LMBR1Q8WVP7 490 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 CABP5Q9NP86 173 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 SAR1BQ9Y6B6 198 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 UNC13BO14795 1591 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 RTL9Q8NET4 1388 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 USP5P45974 858 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 ASIC1P78348 528 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 SPATS2Q86XZ4 545 aaKnown RBP19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 ANKIB1Q9P2G1 1089 aa19.36■□□□□ 0.69
HMGXB3-201ENST00000502717 E7EWF7 191 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 SLF1Q9BQI6 1058 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 CALM1P0DP23 149 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 CALM2P0DP24 149 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 CALM3P0DP25 149 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 SND1Q7KZF4 910 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 NUP58Q9BVL2 599 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 NAA25Q14CX7 972 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 SUCLG2Q96I99 432 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 CALML3P27482 149 aa19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGXB3-201ENST00000502717 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 PPP1R2P41236 205 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 TBC1D8BQ0IIM8 1120 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 EFCAB6Q5THR3 1501 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 EFCAB13Q8IY85 973 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 SECISBP2LQ93073 1101 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 KIF4AO95239 1232 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 DIS3L2Q8IYB7 885 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 DEXIO95424 95 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 LARGE1O95461 756 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 TRMT44Q8IYL2 757 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 ZNF444Q8N0Y2 327 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 TRIML1Q8N9V2 468 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 SLC4A4Q9Y6R1 1079 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 SAMD15Q9P1V8 674 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 RASAL2Q9UJF2 1139 aa19.34■□□□□ 0.69
HMGXB3-201ENST00000502717 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.69
HMGXB3-201ENST00000502717 GNAT2P19087 354 aa19.33■□□□□ 0.69
HMGXB3-201ENST00000502717 PDE4BQ07343 736 aa19.33■□□□□ 0.69
HMGXB3-201ENST00000502717 PAK1Q13153 545 aa19.33■□□□□ 0.69
HMGXB3-201ENST00000502717 DPCR1Q3MIW9 517 aa19.33■□□□□ 0.69
HMGXB3-201ENST00000502717 TSPY2A6NKD2 308 aa19.33■□□□□ 0.68
HMGXB3-201ENST00000502717 KLHDC4Q8TBB5 520 aa19.33■□□□□ 0.68
HMGXB3-201ENST00000502717 EAF2Q96CJ1 260 aaPredicted RBP19.33■□□□□ 0.68
HMGXB3-201ENST00000502717 PARD6BQ9BYG5 372 aa19.33■□□□□ 0.68
HMGXB3-201ENST00000502717 ZNF622Q969S3 477 aaKnown RBP eCLIP19.33■□□□□ 0.682e-6■■□□□ 12.3
HMGXB3-201ENST00000502717 DCAF5Q96JK2 942 aa19.33■□□□□ 0.68
HMGXB3-201ENST00000502717 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 TCERG1LQ5VWI1 586 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 SLF2Q8IX21 1173 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 SCRN1Q12765 414 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 ABCC3O15438 1527 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 VWA3AA6NCI4 1184 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 APPBP2Q92624 585 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 RABEP2Q9H5N1 569 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 GOLGA8KD6RF30 607 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 ST5P78524 1137 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 335.6 ms