RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ABT1Q9ULW3 272 aaKnown RBP18.78■□□□□ 0.6
CPNE1-228ENST00000498814 PPP1R12BO60237 982 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-228ENST00000498814 TGFBRAP1Q8WUH2 860 aa18.77■□□□□ 0.6
CPNE1-228ENST00000498814 APPBP2Q92624 585 aa18.77■□□□□ 0.6
CPNE1-228ENST00000498814 ATRNL1Q5VV63 1379 aa18.77■□□□□ 0.6
CPNE1-228ENST00000498814 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 TRIM6-TRIM34B2RNG4 842 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-228ENST00000498814 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 SH3BP5LQ7L8J4 393 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 ARMC9Q7Z3E5 817 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 LCORLQ8N3X6 602 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 HHIPL1Q96JK4 782 aa18.76■□□□□ 0.59
CPNE1-228ENST00000498814 CRNKL1Q9BZJ0 848 aaKnown RBP18.76■□□□□ 0.59
CPNE1-228ENST00000498814 PUS7LQ9H0K6 701 aaKnown RBP18.76■□□□□ 0.59
CPNE1-228ENST00000498814 OSBPL5Q9H0X9 879 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-228ENST00000498814 USP2O75604 605 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-228ENST00000498814 MBD4O95243 580 aa18.75■□□□□ 0.59
CPNE1-228ENST00000498814 HUNKP57058 714 aa18.75■□□□□ 0.59
CPNE1-228ENST00000498814 MAPKAPK5Q8IW41 473 aa18.75■□□□□ 0.59
CPNE1-228ENST00000498814 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
CPNE1-228ENST00000498814 ARMT1Q9H993 441 aa18.75■□□□□ 0.59
CPNE1-228ENST00000498814 FLT1P17948 1338 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 NAV1Q8NEY1 1877 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 DDTLA6NHG4 134 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-228ENST00000498814 USP5P45974 858 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 PRKG1Q13976 671 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 DEFB115Q30KQ5 88 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 DCAF15Q66K64 600 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 MOB2Q70IA6 237 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-228ENST00000498814 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
CPNE1-228ENST00000498814 DHX36Q9H2U1 1008 aaKnown RBP18.74■□□□□ 0.59
CPNE1-228ENST00000498814 ANGEL1Q9UNK9 670 aaKnown RBP18.74■□□□□ 0.59
CPNE1-228ENST00000498814 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 UNCXA6NJT0 531 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 UBE2Q2LH0YL09 131 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 IREB2P48200 963 aaKnown RBP18.73■□□□□ 0.59
CPNE1-228ENST00000498814 LDLRAD1Q5T700 205 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 DNAJC5GQ8N7S2 189 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 MKRN1Q9UHC7 482 aaKnown RBP18.73■□□□□ 0.59
CPNE1-228ENST00000498814 FZD1Q9UP38 647 aa18.73■□□□□ 0.59
CPNE1-228ENST00000498814 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
CPNE1-228ENST00000498814 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
CPNE1-228ENST00000498814 SIPA1L1O43166 1804 aa18.72■□□□□ 0.59
CPNE1-228ENST00000498814 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
CPNE1-228ENST00000498814 MAP3K10Q02779 954 aa18.72■□□□□ 0.59
CPNE1-228ENST00000498814 STRBPQ96SI9 672 aaKnown RBP18.72■□□□□ 0.59
CPNE1-228ENST00000498814 CEP350Q5VT06 3117 aa18.72■□□□□ 0.59
CPNE1-228ENST00000498814 TBC1D12O60347 775 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 MIGA2Q7L4E1 593 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 KLRG1Q96E93 195 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 ZNF341Q9BYN7 854 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 ATP8A2Q9NTI2 1148 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
CPNE1-228ENST00000498814 M0R2C6 588 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 GPAA1O43292 621 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 PRKAB2O43741 272 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 SDSP20132 328 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 RGMBQ6NW40 437 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 SDR42E1Q8WUS8 393 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 SEC62Q99442 399 aaKnown RBP18.7■□□□□ 0.58
CPNE1-228ENST00000498814 DCP1AQ9NPI6 582 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-228ENST00000498814 HELLSQ9NRZ9 838 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 SAP30BPQ9UHR5 308 aaKnown RBP18.7■□□□□ 0.58
CPNE1-228ENST00000498814 ZNF112Q9UJU3 913 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 PALD1Q9ULE6 856 aa18.7■□□□□ 0.58
CPNE1-228ENST00000498814 GNAT2P19087 354 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 ECE1P42892 770 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 MAP3K9P80192 1104 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 FOXP4Q8IVH2 680 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-228ENST00000498814 ANKRD13AQ8IZ07 590 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.69■□□□□ 0.582e-14■□□□□ 9.9
CPNE1-228ENST00000498814 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
CPNE1-228ENST00000498814 HIP1O00291 1037 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 HLA-DOAP06340 250 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 VEGFBP49765 207 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 ZNF157P51786 506 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-228ENST00000498814 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-228ENST00000498814 TTC6Q86TZ1 520 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 METTL16Q86W50 562 aaKnown RBP18.68■□□□□ 0.58
CPNE1-228ENST00000498814 CCDC102AQ96A19 550 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 CAPNS2Q96L46 248 aa18.68■□□□□ 0.58
CPNE1-228ENST00000498814 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
CPNE1-228ENST00000498814 GSG1L2A8MUP6 293 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 NMIQ13287 307 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-228ENST00000498814 MCMDC2Q4G0Z9 681 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 GIMAP6Q6P9H5 292 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 PAXIP1Q6ZW49 1069 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-228ENST00000498814 DDRGK1Q96HY6 314 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 FAM227BQ96M60 508 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 WRNIP1Q96S55 665 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
CPNE1-228ENST00000498814 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms