RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 UFL1O94874 794 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 USP5P45974 858 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 JCADQ9P266 1359 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 DHX16O60231 1041 aaKnown RBP13.9□□□□□ -0.18
HCN3-204ENST00000496230 VEGFAP15692 232 aaPredicted RBP13.9□□□□□ -0.18
HCN3-204ENST00000496230 NDUFA8P51970 172 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 PICALMQ13492 652 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 TRIM29Q14134 588 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
HCN3-204ENST00000496230 EIF6P56537 245 aaKnown RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 ZRSR1Q15695 479 aaKnown RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 FBXO18Q8NFZ0 1043 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 TNKSO95271 1327 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 KINO60870 393 aaKnown RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 SERPINB2P05120 415 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 NOM1Q5C9Z4 860 aaKnown RBP13.89□□□□□ -0.19
HCN3-204ENST00000496230 OXER1Q8TDS5 423 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 TRIM5Q9C035 493 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 NRBP1Q9UHY1 535 aa13.89□□□□□ -0.19
HCN3-204ENST00000496230 ABCC6O95255 1503 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 LRP6O75581 1613 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
HCN3-204ENST00000496230 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 STX8Q9UNK0 236 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 ZNF165P49910 485 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
HCN3-204ENST00000496230 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
HCN3-204ENST00000496230 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
HCN3-204ENST00000496230 TSPY2A6NKD2 308 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 APBA3O96018 575 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 SCNN1DP51172 638 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 SART3Q15020 963 aaKnown RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 RTN1Q16799 776 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.19
HCN3-204ENST00000496230 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 GRIN1Q05586 938 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 UBE4AQ14139 1066 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 NYXQ9GZU5 481 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
HCN3-204ENST00000496230 LTBP4Q8N2S1 1624 aa13.87□□□□□ -0.19
HCN3-204ENST00000496230 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 G3V3G9 751 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 GPSM2P81274 684 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 MYSM1Q5VVJ2 828 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 SPTLC2O15270 562 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 TM4SF1P30408 202 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 ATP2B2Q01814 1243 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 AKAP17AQ02040 695 aaKnown RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 STAMQ92783 540 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
HCN3-204ENST00000496230 COBLO75128 1261 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
HCN3-204ENST00000496230 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
HCN3-204ENST00000496230 BECN2A8MW95 431 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 GRAMD1CQ8IYS0 662 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 TRPC5Q9UL62 973 aaPredicted RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 GYS1P13807 737 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 CACNB3P54284 484 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 GTF2IP78347 998 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 KIF23Q02241 960 aaPredicted RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 ENAHQ8N8S7 591 aaPredicted RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 RIOK1Q9BRS2 568 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms