RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 CLASRPQ8N2M8 674 aaKnown RBP16.31■□□□□ 0.2
RBM28-208ENST00000495327 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
RBM28-208ENST00000495327 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
RBM28-208ENST00000495327 NAA16Q6N069 864 aaPredicted RBP16.3■□□□□ 0.2
RBM28-208ENST00000495327 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
RBM28-208ENST00000495327 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
RBM28-208ENST00000495327 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
RBM28-208ENST00000495327 MYH1P12882 1939 aa16.29■□□□□ 0.2
RBM28-208ENST00000495327 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
RBM28-208ENST00000495327 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
RBM28-208ENST00000495327 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
RBM28-208ENST00000495327 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
RBM28-208ENST00000495327 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
RBM28-208ENST00000495327 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
RBM28-208ENST00000495327 IGF2BP3O00425 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
RBM28-208ENST00000495327 MAP3K10Q02779 954 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 PICALMQ13492 652 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 NOL9Q5SY16 702 aaKnown RBP16.28■□□□□ 0.2
RBM28-208ENST00000495327 MIGA2Q7L4E1 593 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
RBM28-208ENST00000495327 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
RBM28-208ENST00000495327 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
RBM28-208ENST00000495327 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
RBM28-208ENST00000495327 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
RBM28-208ENST00000495327 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
RBM28-208ENST00000495327 TBC1D8O95759 1140 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 BAG3O95817 575 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 PLCG2P16885 1265 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 INPP5BP32019 993 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 GTF2A2P52657 109 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 PPP4CP60510 307 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 PPIL2Q13356 520 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
RBM28-208ENST00000495327 YTHDC1Q96MU7 727 aaKnown RBP16.27■□□□□ 0.2
RBM28-208ENST00000495327 APBB1O00213 710 aa16.26■□□□□ 0.19
RBM28-208ENST00000495327 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
RBM28-208ENST00000495327 PPATQ06203 517 aa16.26■□□□□ 0.19
RBM28-208ENST00000495327 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
RBM28-208ENST00000495327 CERS3Q8IU89 383 aa16.26■□□□□ 0.19
RBM28-208ENST00000495327 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
RBM28-208ENST00000495327 TEX11Q8IYF3 940 aa16.26■□□□□ 0.19
RBM28-208ENST00000495327 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
RBM28-208ENST00000495327 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
RBM28-208ENST00000495327 CCL15-CCL14A0A0B4J2E2 113 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 GPR25O00155 361 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
RBM28-208ENST00000495327 CCL15Q16663 113 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
RBM28-208ENST00000495327 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
RBM28-208ENST00000495327 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 PTPN18Q99952 460 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
RBM28-208ENST00000495327 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 PHF20L1A8MW92 1017 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 IRF6O14896 467 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 TBC1D12O60347 775 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 MAP3K12Q12852 859 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 DGKZQ13574 1117 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 TTF1Q15361 905 aaPredicted RBP16.24■□□□□ 0.19
RBM28-208ENST00000495327 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
RBM28-208ENST00000495327 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
RBM28-208ENST00000495327 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
RBM28-208ENST00000495327 CETPP11597 493 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 CYP7A1P22680 504 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 R3HDMLQ9H3Y0 253 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 HTTP42858 3142 aa16.23■□□□□ 0.19
RBM28-208ENST00000495327 FLT1P17948 1338 aa16.22■□□□□ 0.19
RBM28-208ENST00000495327 FKTNO75072 461 aa16.22■□□□□ 0.19
RBM28-208ENST00000495327 CRHR2Q13324 411 aa16.22■□□□□ 0.19
RBM28-208ENST00000495327 MAGEB6Q8N7X4 407 aa16.22■□□□□ 0.19
RBM28-208ENST00000495327 DHX36Q9H2U1 1008 aaKnown RBP16.22■□□□□ 0.19
RBM28-208ENST00000495327 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
RBM28-208ENST00000495327 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
RBM28-208ENST00000495327 CAPN15O75808 1086 aa16.21■□□□□ 0.19
RBM28-208ENST00000495327 ATP5JP18859 108 aa16.21■□□□□ 0.19
RBM28-208ENST00000495327 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
RBM28-208ENST00000495327 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
RBM28-208ENST00000495327 MYH8P13535 1937 aa16.2■□□□□ 0.18
RBM28-208ENST00000495327 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
RBM28-208ENST00000495327 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
RBM28-208ENST00000495327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.2■□□□□ 0.18
RBM28-208ENST00000495327 PICK1Q9NRD5 415 aa16.2■□□□□ 0.18
RBM28-208ENST00000495327 BTBD19C9JJ37 291 aa16.19■□□□□ 0.18
RBM28-208ENST00000495327 GOLIM4O00461 696 aa16.19■□□□□ 0.18
RBM28-208ENST00000495327 CXCL11O14625 94 aa16.19■□□□□ 0.18
RBM28-208ENST00000495327 SLURP2P0DP57 97 aa16.19■□□□□ 0.18
RBM28-208ENST00000495327 PTPRAP18433 802 aa16.19■□□□□ 0.18
RBM28-208ENST00000495327 DYNLL1P63167 89 aaKnown RBP16.19■□□□□ 0.18
RBM28-208ENST00000495327 TAF1CQ15572 869 aaPredicted RBP16.19■□□□□ 0.18
RBM28-208ENST00000495327 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms