RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 IRS2Q9Y4H2 1338 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 BAZ2BQ9UIF8 2168 aaKnown RBP12.16□□□□□ -0.46
SAMM50-206ENST00000494795 DDR1Q08345 913 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 TICAM2Q86XR7 235 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 ESPNB1AK53 854 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 HIBADHP31937 336 aaKnown RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 HMGN5P82970 282 aaKnown RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 CCDC173Q0VFZ6 552 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 PDLIM2Q96JY6 352 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 ALX1Q15699 326 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-206ENST00000494795 LY75O60449 1722 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 ELP1O95163 1332 aa12.15□□□□□ -0.46
SAMM50-206ENST00000494795 USP17L12C9JPN9 530 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 USP17L21D6R901 530 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 LUZP1Q86V48 1076 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 NUP133Q8WUM0 1156 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 KCNJ14Q9UNX9 436 aa12.15□□□□□ -0.47
SAMM50-206ENST00000494795 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 GOLGA6L4A6NEF3 574 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 ALG1Q9BT22 464 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 ZBTB43O43298 467 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 MARCKSP29966 332 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-206ENST00000494795 GPSM2P81274 684 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 SNW1Q13573 536 aaKnown RBP12.14□□□□□ -0.47
SAMM50-206ENST00000494795 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 NUP62CLQ9H1M0 184 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 PCDHA7Q9UN72 937 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
SAMM50-206ENST00000494795 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-206ENST00000494795 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
SAMM50-206ENST00000494795 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-206ENST00000494795 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 SERPINB2P05120 415 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 ME1P48163 572 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
SAMM50-206ENST00000494795 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 SLC12A7Q9Y666 1083 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 KRT40Q6A162 431 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 TNMDQ9H2S6 317 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
SAMM50-206ENST00000494795 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
SAMM50-206ENST00000494795 CHD4Q14839 1912 aa12.12□□□□□ -0.47
SAMM50-206ENST00000494795 DYNLL2Q96FJ2 89 aa12.12□□□□□ -0.47
SAMM50-206ENST00000494795 WDHD1O75717 1129 aaPredicted RBP12.12□□□□□ -0.47
SAMM50-206ENST00000494795 TYRO3Q06418 890 aa12.12□□□□□ -0.47
SAMM50-206ENST00000494795 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
SAMM50-206ENST00000494795 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
SAMM50-206ENST00000494795 TNKSO95271 1327 aa12.12□□□□□ -0.47
SAMM50-206ENST00000494795 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 CCDC69A6NI79 296 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 GRAPQ13588 217 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-206ENST00000494795 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-206ENST00000494795 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 ADCY5O95622 1261 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 NDUFA8P51970 172 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 NR5A1Q13285 461 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 WTAPQ15007 396 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms