RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
COL1A1-208ENST00000494334 DDTLA6NHG4 134 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-208ENST00000494334 VEGFBP49765 207 aa16.37■□□□□ 0.21
COL1A1-208ENST00000494334 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
COL1A1-208ENST00000494334 RGMBQ6NW40 437 aa16.37■□□□□ 0.21
COL1A1-208ENST00000494334 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-208ENST00000494334 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
COL1A1-208ENST00000494334 OSBPL5Q9H0X9 879 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-208ENST00000494334 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
COL1A1-208ENST00000494334 LDLRAD1Q5T700 205 aa16.36■□□□□ 0.21
COL1A1-208ENST00000494334 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
COL1A1-208ENST00000494334 MAPKAPK5Q8IW41 473 aa16.36■□□□□ 0.21
COL1A1-208ENST00000494334 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-208ENST00000494334 HOOK2Q96ED9 719 aa16.36■□□□□ 0.21
COL1A1-208ENST00000494334 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
COL1A1-208ENST00000494334 IREB2P48200 963 aaKnown RBP16.35■□□□□ 0.21
COL1A1-208ENST00000494334 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
COL1A1-208ENST00000494334 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
COL1A1-208ENST00000494334 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
COL1A1-208ENST00000494334 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 FLT1P17948 1338 aa16.35■□□□□ 0.21
COL1A1-208ENST00000494334 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
COL1A1-208ENST00000494334 MBD4O95243 580 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 ZFYP08048 801 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-208ENST00000494334 ECE1P42892 770 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 USP5P45974 858 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 GRM1Q13255 1194 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
COL1A1-208ENST00000494334 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 OSBP2Q969R2 916 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
COL1A1-208ENST00000494334 UNCXA6NJT0 531 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 FAM155AB1AL88 458 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-208ENST00000494334 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 MAP3K9P80192 1104 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 ANKRD13AQ8IZ07 590 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL1A1-208ENST00000494334 APPBP2Q92624 585 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
COL1A1-208ENST00000494334 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
COL1A1-208ENST00000494334 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
COL1A1-208ENST00000494334 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 PRKAB2O43741 272 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 COL2A1P02458 1487 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-208ENST00000494334 SLC10A3P09131 477 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-208ENST00000494334 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 SDR42E1Q8WUS8 393 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
COL1A1-208ENST00000494334 TBC1D12O60347 775 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 AOC2O75106 756 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 SLC10A4Q96EP9 437 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
COL1A1-208ENST00000494334 SEC62Q99442 399 aaKnown RBP16.31■□□□□ 0.2
COL1A1-208ENST00000494334 DCP1AQ9NPI6 582 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-208ENST00000494334 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-208ENST00000494334 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 SAP30BPQ9UHR5 308 aaKnown RBP16.31■□□□□ 0.2
COL1A1-208ENST00000494334 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
COL1A1-208ENST00000494334 M0R2C6 588 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 INPP5BP32019 993 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 VGLL4Q14135 290 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-208ENST00000494334 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
COL1A1-208ENST00000494334 PHF20L1A8MW92 1017 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 GPAA1O43292 621 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
COL1A1-208ENST00000494334 MAP2K2P36507 400 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 NOGQ13253 232 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 SLC4A8Q2Y0W8 1093 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 TTC22Q5TAA0 569 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
COL1A1-208ENST00000494334 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-208ENST00000494334 ELP3Q9H9T3 547 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL1A1-208ENST00000494334 ATP8A2Q9NTI2 1148 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
COL1A1-208ENST00000494334 FAM196BA6NMK8 535 aa16.28■□□□□ 0.2
COL1A1-208ENST00000494334 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
COL1A1-208ENST00000494334 SKAP1Q86WV1 359 aa16.28■□□□□ 0.2
COL1A1-208ENST00000494334 MCM9Q9NXL9 1143 aa16.28■□□□□ 0.2
COL1A1-208ENST00000494334 HERC5Q9UII4 1024 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms