RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
ATG4B-224ENST00000494132 DDTLA6NHG4 134 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-224ENST00000494132 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
ATG4B-224ENST00000494132 SH3BP5LQ7L8J4 393 aa17.95■□□□□ 0.46
ATG4B-224ENST00000494132 DNAJC2Q99543 621 aaKnown RBP17.95■□□□□ 0.46
ATG4B-224ENST00000494132 CSADQ9Y600 493 aa17.95■□□□□ 0.46
ATG4B-224ENST00000494132 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
ATG4B-224ENST00000494132 ENTPD3O75355 529 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 ZBTB48P10074 688 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-224ENST00000494132 INPP5BP32019 993 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 TEX11Q8IYF3 940 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-224ENST00000494132 OTUD5Q96G74 571 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 ZNF341Q9BYN7 854 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 SNCAIPQ9Y6H5 919 aa17.94■□□□□ 0.46
ATG4B-224ENST00000494132 TM4SF4P48230 202 aa17.93■□□□□ 0.46
ATG4B-224ENST00000494132 DYNLL1P63167 89 aaKnown RBP17.93■□□□□ 0.46
ATG4B-224ENST00000494132 SREBF2Q12772 1141 aa17.93■□□□□ 0.46
ATG4B-224ENST00000494132 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
ATG4B-224ENST00000494132 HOOK2Q96ED9 719 aa17.93■□□□□ 0.46
ATG4B-224ENST00000494132 EDC3Q96F86 508 aaKnown RBP17.93■□□□□ 0.46
ATG4B-224ENST00000494132 NOL10Q9BSC4 688 aaKnown RBP17.93■□□□□ 0.46
ATG4B-224ENST00000494132 SAGE1Q9NXZ1 904 aa17.93■□□□□ 0.46
ATG4B-224ENST00000494132 ATRNL1Q5VV63 1379 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 UNCXA6NJT0 531 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 FAM196BA6NMK8 535 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
ATG4B-224ENST00000494132 CAPN15O75808 1086 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 CYP7A1P22680 504 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-224ENST00000494132 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 PTPRFP10586 1907 aa17.92■□□□□ 0.46
ATG4B-224ENST00000494132 PHIPQ8WWQ0 1821 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 NAV1Q8NEY1 1877 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 MANSC4A6NHS7 340 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-224ENST00000494132 GOLIM4O00461 696 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 R3HDMLQ9H3Y0 253 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 DCTPP1Q9H773 170 aa17.91■□□□□ 0.46
ATG4B-224ENST00000494132 SPDYE5A6NIY4 337 aa17.9■□□□□ 0.46
ATG4B-224ENST00000494132 SLC4A8Q2Y0W8 1093 aa17.9■□□□□ 0.46
ATG4B-224ENST00000494132 IFNL1Q8IU54 200 aa17.9■□□□□ 0.46
ATG4B-224ENST00000494132 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
ATG4B-224ENST00000494132 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-224ENST00000494132 BAG3O95817 575 aa17.89■□□□□ 0.45
ATG4B-224ENST00000494132 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
ATG4B-224ENST00000494132 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-224ENST00000494132 BAZ2AQ9UIF9 1905 aaKnown RBP17.88■□□□□ 0.45
ATG4B-224ENST00000494132 CCL15-CCL14A0A0B4J2E2 113 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 IRF6O14896 467 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 PPP4CP60510 307 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 MAP3K12Q12852 859 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 CCL15Q16663 113 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 ERO1BQ86YB8 467 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATG4B-224ENST00000494132 BRI3BPQ8WY22 251 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 MS4A4AQ96JQ5 239 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 PTPN18Q99952 460 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 ZNF112Q9UJU3 913 aa17.88■□□□□ 0.45
ATG4B-224ENST00000494132 SLFNL1Q499Z3 407 aa17.87■□□□□ 0.45
ATG4B-224ENST00000494132 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
ATG4B-224ENST00000494132 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
ATG4B-224ENST00000494132 FLT1P17948 1338 aa17.87■□□□□ 0.45
ATG4B-224ENST00000494132 PHF20L1A8MW92 1017 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 CHGBP05060 677 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 PDE6AP16499 860 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 PLCG2P16885 1265 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 ATP5JP18859 108 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 INHBEP58166 350 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 ZNF296Q8WUU4 475 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 COL2A1P02458 1487 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
ATG4B-224ENST00000494132 MYH8P13535 1937 aa17.86■□□□□ 0.45
ATG4B-224ENST00000494132 ZSWIM8A7E2V4 1837 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
ATG4B-224ENST00000494132 MAP4K4O95819 1239 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-224ENST00000494132 GTF2A2P52657 109 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 PPIL2Q13356 520 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 DGKZQ13574 1117 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.85■□□□□ 0.45
ATG4B-224ENST00000494132 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
ATG4B-224ENST00000494132 TESPA1A2RU30 521 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-224ENST00000494132 GPR25O00155 361 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 PPATQ06203 517 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 CRHR2Q13324 411 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 NOL9Q5SY16 702 aaKnown RBP17.84■□□□□ 0.45
ATG4B-224ENST00000494132 SCYL3Q8IZE3 742 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-224ENST00000494132 HAUS7Q99871 368 aa17.84■□□□□ 0.45
ATG4B-224ENST00000494132 MCOLN1Q9GZU1 580 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms