RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZBTB7BO15156 539 aaPredicted RBP22.05■■□□□ 1.12
NUP50-218ENST00000493456 ADCY3O60266 1144 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 ENTPD3O75355 529 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 SGPL1O95470 568 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 PTPRAP18433 802 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 PXYLP1Q8TE99 480 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 IDI2Q9BXS1 227 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 DENND2AQ9ULE3 1009 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 ZHX2Q9Y6X8 837 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 IRF5Q13568 498 aa22.04■■□□□ 1.12
NUP50-218ENST00000493456 ATP2B3Q16720 1220 aa22.04■■□□□ 1.12
NUP50-218ENST00000493456 ATG9AQ7Z3C6 839 aa22.04■■□□□ 1.12
NUP50-218ENST00000493456 ZGPATQ8N5A5 531 aaKnown RBP22.04■■□□□ 1.12
NUP50-218ENST00000493456 AFG3L2Q9Y4W6 797 aa22.04■■□□□ 1.12
NUP50-218ENST00000493456 RFX7Q2KHR2 1363 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 ZBTB22O15209 634 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 CIAO1O76071 339 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 FLT3LGP49771 235 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 RGS3P49796 1198 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 ZFPM1Q8IX07 1006 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
NUP50-218ENST00000493456 TNPO2O14787 897 aaKnown RBP22.02■■□□□ 1.12
NUP50-218ENST00000493456 INHAP05111 366 aa22.02■■□□□ 1.12
NUP50-218ENST00000493456 MAP3K10Q02779 954 aa22.02■■□□□ 1.12
NUP50-218ENST00000493456 GADL1Q6ZQY3 521 aa22.02■■□□□ 1.12
NUP50-218ENST00000493456 SMCR8Q8TEV9 937 aaPredicted RBP22.02■■□□□ 1.12
NUP50-218ENST00000493456 CEP126Q9P2H0 1117 aa22.02■■□□□ 1.12
NUP50-218ENST00000493456 LRRFIP2Q9Y608 721 aaKnown RBP22.02■■□□□ 1.12
NUP50-218ENST00000493456 GAKO14976 1311 aa22.02■■□□□ 1.12
NUP50-218ENST00000493456 EVI5O60447 810 aa22.01■■□□□ 1.11
NUP50-218ENST00000493456 DOCK1Q14185 1865 aa22■■□□□ 1.11
NUP50-218ENST00000493456 CTNND1O60716 968 aaKnown RBP22■■□□□ 1.11
NUP50-218ENST00000493456 ZSCAN29Q8IWY8 852 aaPredicted RBP22■■□□□ 1.11
NUP50-218ENST00000493456 SLF2Q8IX21 1173 aa22■■□□□ 1.11
NUP50-218ENST00000493456 PAK6Q9NQU5 681 aaPredicted RBP22■■□□□ 1.11
NUP50-218ENST00000493456 PTPRFP10586 1907 aa22■■□□□ 1.11
NUP50-218ENST00000493456 TFRCP02786 760 aaKnown RBP21.99■■□□□ 1.11
NUP50-218ENST00000493456 ELNP15502 786 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 PHKA1P46020 1223 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 DZIP1Q86YF9 867 aaKnown RBP21.99■■□□□ 1.11
NUP50-218ENST00000493456 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 SSH1Q8WYL5 1049 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 SIL1Q9H173 461 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 AGTPBP1Q9UPW5 1226 aa21.99■■□□□ 1.11
NUP50-218ENST00000493456 PDS5AQ29RF7 1337 aaKnown RBP21.99■■□□□ 1.11
NUP50-218ENST00000493456 MYH2Q9UKX2 1941 aa21.98■■□□□ 1.11
NUP50-218ENST00000493456 IL15P40933 162 aaPredicted RBP21.98■■□□□ 1.11
NUP50-218ENST00000493456 SH3BP5LQ7L8J4 393 aa21.98■■□□□ 1.11
NUP50-218ENST00000493456 COA7Q96BR5 231 aa21.98■■□□□ 1.11
NUP50-218ENST00000493456 DEFB118Q96PH6 123 aa21.98■■□□□ 1.11
NUP50-218ENST00000493456 PNMA3Q9UL41 463 aa21.98■■□□□ 1.11
NUP50-218ENST00000493456 PHIPQ8WWQ0 1821 aa21.97■■□□□ 1.11
NUP50-218ENST00000493456 TRIM75PA6NK02 468 aa21.97■■□□□ 1.11
NUP50-218ENST00000493456 FAM110CQ1W6H9 321 aa21.97■■□□□ 1.11
NUP50-218ENST00000493456 FAM163AQ96GL9 167 aaPredicted RBP21.97■■□□□ 1.11
NUP50-218ENST00000493456 CRISPLD2Q9H0B8 497 aa21.97■■□□□ 1.11
NUP50-218ENST00000493456 DDTLA6NHG4 134 aaPredicted RBP21.96■■□□□ 1.11
NUP50-218ENST00000493456 UBTFL1P0CB47 393 aaPredicted RBP21.96■■□□□ 1.11
NUP50-218ENST00000493456 E9PSI1 815 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 SPTY2D1Q68D10 685 aaPredicted RBP21.95■■□□□ 1.1
NUP50-218ENST00000493456 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 ANKRD13CQ8N6S4 541 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 PROCA1Q8NCQ7 364 aaPredicted RBP21.95■■□□□ 1.1
NUP50-218ENST00000493456 SLC17A8Q8NDX2 589 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 DDX4Q9NQI0 724 aaKnown RBP21.95■■□□□ 1.1
NUP50-218ENST00000493456 HDAC5Q9UQL6 1122 aa21.95■■□□□ 1.1
NUP50-218ENST00000493456 TBC1D12O60347 775 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 BTDP43251 543 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 NECAB2Q7Z6G3 386 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 ANKLE1Q8NAG6 615 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 TBC1D2Q9BYX2 928 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 TAOK2Q9UL54 1235 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 MROH7-TTC4A0A0A0MT08 1334 aa21.94■■□□□ 1.1
NUP50-218ENST00000493456 NPM3O75607 178 aaKnown RBP21.93■■□□□ 1.1
NUP50-218ENST00000493456 PICALMQ13492 652 aa21.93■■□□□ 1.1
NUP50-218ENST00000493456 RASGRF1Q13972 1273 aa21.93■■□□□ 1.1
NUP50-218ENST00000493456 PAWRQ96IZ0 340 aaKnown RBP21.93■■□□□ 1.1
NUP50-218ENST00000493456 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.93■■□□□ 1.1
NUP50-218ENST00000493456 ABCF2Q9UG63 623 aa21.93■■□□□ 1.1
NUP50-218ENST00000493456 LOC285556D6RIA3 1793 aa21.92■■□□□ 1.1
NUP50-218ENST00000493456 HMGCRP04035 888 aa21.92■■□□□ 1.1
NUP50-218ENST00000493456 ADORA1P30542 326 aa21.92■■□□□ 1.1
NUP50-218ENST00000493456 GCLCP48506 637 aaPredicted RBP21.92■■□□□ 1.1
NUP50-218ENST00000493456 PABPC4Q13310 644 aaKnown RBP eCLIP21.92■■□□□ 1.1
NUP50-218ENST00000493456 TREML2Q5T2D2 321 aa21.92■■□□□ 1.1
NUP50-218ENST00000493456 OSBPL5Q9H0X9 879 aaPredicted RBP21.92■■□□□ 1.1
NUP50-218ENST00000493456 STAP2Q9UGK3 403 aa21.92■■□□□ 1.1
NUP50-218ENST00000493456 COL2A1P02458 1487 aaPredicted RBP21.91■■□□□ 1.1
NUP50-218ENST00000493456 SOX1O00570 391 aaPredicted RBP21.91■■□□□ 1.1
NUP50-218ENST00000493456 MAP4K4O95819 1239 aaPredicted RBP21.91■■□□□ 1.1
NUP50-218ENST00000493456 COPRSQ9NQ92 184 aa21.91■■□□□ 1.1
NUP50-218ENST00000493456 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.91■■□□□ 1.1
NUP50-218ENST00000493456 GPR75-ASB3A0A0A6YYF3 556 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 DLL1O00548 723 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 SLURP2P0DP57 97 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 BMP8BP34820 402 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 GPR153Q6NV75 609 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.9■■□□□ 1.1
NUP50-218ENST00000493456 SMC4Q9NTJ3 1288 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms