RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, human

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-223	ENST00000492275	FAM155A	B1AL88	458 aa	Predicted RBP	31.28	■■■□□ 2.6
TTC3-223	ENST00000492275	GLRX3	O76003	335 aa	Known RBP	31.28	■■■□□ 2.6
TTC3-223	ENST00000492275	PLCG2	P16885	1265 aa		31.28	■■■□□ 2.6
TTC3-223	ENST00000492275	SLFNL1	Q499Z3	407 aa		31.28	■■■□□ 2.6
TTC3-223	ENST00000492275	CHGB	P05060	677 aa		31.27	■■■□□ 2.6
TTC3-223	ENST00000492275	ADD2	P35612	726 aa		31.27	■■■□□ 2.6
TTC3-223	ENST00000492275	PDE1A	P54750	535 aa		31.27	■■■□□ 2.6
TTC3-223	ENST00000492275	OTOF	Q9HC10	1997 aa		31.26	■■■□□ 2.6
TTC3-223	ENST00000492275	DDTL	A6NHG4	134 aa	Predicted RBP	31.26	■■■□□ 2.59
TTC3-223	ENST00000492275	AOC2	O75106	756 aa		31.26	■■■□□ 2.59
TTC3-223	ENST00000492275	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.26	■■■□□ 2.59	9e-9	■□□□□ 10.8
TTC3-223	ENST00000492275	IREB2	P48200	963 aa	Known RBP	31.25	■■■□□ 2.59
TTC3-223	ENST00000492275	CCDC102A	Q96A19	550 aa		31.25	■■■□□ 2.59
TTC3-223	ENST00000492275	RIOK1	Q9BRS2	568 aa	Known RBP	31.25	■■■□□ 2.59
TTC3-223	ENST00000492275	THSD7B	Q9C0I4	1608 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	SLC10A3	P09131	477 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	MIGA2	Q7L4E1	593 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	RASAL3	Q86YV0	1011 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	KBTBD3	Q8NAB2	608 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	TGFBRAP1	Q8WUH2	860 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	HOOK2	Q96ED9	719 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	CLMN	Q96JQ2	1002 aa		31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.24	■■■□□ 2.59
TTC3-223	ENST00000492275	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.23	■■■□□ 2.59
TTC3-223	ENST00000492275	ZIC5	Q96T25	663 aa		31.23	■■■□□ 2.59
TTC3-223	ENST00000492275	ATRNL1	Q5VV63	1379 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	MAGEB6P1	A0A0J9YX57	407 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	UNCX	A6NJT0	531 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	UBE3C	Q15386	1083 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	PLEKHM2	Q8IWE5	1019 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	CSRNP1	Q96S65	589 aa		31.22	■■■□□ 2.59
TTC3-223	ENST00000492275	MAP2K2	P36507	400 aa		31.21	■■■□□ 2.59
TTC3-223	ENST00000492275	DCAF15	Q66K64	600 aa		31.21	■■■□□ 2.59
TTC3-223	ENST00000492275	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.21	■■■□□ 2.59
TTC3-223	ENST00000492275	CERS3	Q8IU89	383 aa		31.21	■■■□□ 2.59
TTC3-223	ENST00000492275	MAPKAPK5	Q8IW41	473 aa		31.21	■■■□□ 2.59
TTC3-223	ENST00000492275	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.21	■■■□□ 2.59	1e-9	■□□□□ 8.5
TTC3-223	ENST00000492275	MYH1	P12882	1939 aa		31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	CENPB	P07199	599 aa	Predicted RBP	31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	SLURP2	P0DP57	97 aa		31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	MAP3K9	P80192	1104 aa		31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	ZSCAN25	Q6NSZ9	544 aa		31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	ANKRD13A	Q8IZ07	590 aa		31.2	■■■□□ 2.59
TTC3-223	ENST00000492275	FLT1	P17948	1338 aa		31.2	■■■□□ 2.58
TTC3-223	ENST00000492275	COL2A1	P02458	1487 aa	Predicted RBP	31.2	■■■□□ 2.58
TTC3-223	ENST00000492275	MAP3K10	Q02779	954 aa		31.19	■■■□□ 2.58
TTC3-223	ENST00000492275	NOG	Q13253	232 aa		31.19	■■■□□ 2.58
TTC3-223	ENST00000492275	SLC10A4	Q96EP9	437 aa		31.19	■■■□□ 2.58
TTC3-223	ENST00000492275	ZNF341	Q9BYN7	854 aa		31.19	■■■□□ 2.58
TTC3-223	ENST00000492275	LCORL	Q8N3X6	602 aa		31.18	■■■□□ 2.58
TTC3-223	ENST00000492275	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	31.18	■■■□□ 2.58
TTC3-223	ENST00000492275	ZNF112	Q9UJU3	913 aa		31.18	■■■□□ 2.58
TTC3-223	ENST00000492275	WRNIP1	Q96S55	665 aa		31.17	■■■□□ 2.58
TTC3-223	ENST00000492275	OSBPL3	Q9H4L5	887 aa		31.17	■■■□□ 2.58
TTC3-223	ENST00000492275	SIPA1L1	O43166	1804 aa		31.17	■■■□□ 2.58
TTC3-223	ENST00000492275	RNF113A	O15541	343 aa	Known RBP	31.16	■■■□□ 2.58
TTC3-223	ENST00000492275	PDE4A	P27815	886 aa		31.16	■■■□□ 2.58
TTC3-223	ENST00000492275	VGLL4	Q14135	290 aa		31.16	■■■□□ 2.58
TTC3-223	ENST00000492275	ARMT1	Q9H993	441 aa		31.16	■■■□□ 2.58
TTC3-223	ENST00000492275	USP5	P45974	858 aa		31.15	■■■□□ 2.58
TTC3-223	ENST00000492275	KIF23	Q02241	960 aa	Predicted RBP	31.15	■■■□□ 2.58
TTC3-223	ENST00000492275	ZKSCAN4	Q969J2	545 aa	Predicted RBP	31.15	■■■□□ 2.58
TTC3-223	ENST00000492275	PUS7L	Q9H0K6	701 aa	Known RBP	31.15	■■■□□ 2.58
TTC3-223	ENST00000492275	PHF20L1	A8MW92	1017 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	MBD4	O95243	580 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	INPP5B	P32019	993 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	SPRYD7	Q5W111	196 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	DHX36	Q9H2U1	1008 aa	Known RBP	31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	ELP3	Q9H9T3	547 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	SAP30BP	Q9UHR5	308 aa	Known RBP	31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	PALD1	Q9ULE6	856 aa		31.14	■■■□□ 2.58
TTC3-223	ENST00000492275	TBC1D12	O60347	775 aa		31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	MKRN3	Q13064	507 aa	Known RBP	31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	WNK4	Q96J92	1243 aa		31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	FSD1	Q9BTV5	496 aa		31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	WBP1L	Q9NX94	342 aa		31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	SNCAIP	Q9Y6H5	919 aa		31.13	■■■□□ 2.57
TTC3-223	ENST00000492275	ZFY	P08048	801 aa	Predicted RBP	31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	GJA5	P36382	358 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	APPBP2	Q92624	585 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	OSBP2	Q969R2	916 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	EVI5L	Q96CN4	794 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	PI4KB	Q9UBF8	816 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	CSAD	Q9Y600	493 aa		31.12	■■■□□ 2.57
TTC3-223	ENST00000492275	FAM196B	A6NMK8	535 aa		31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	PRKAB2	O43741	272 aa		31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	MAP2K1	Q02750	393 aa	Predicted RBP	31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	NAV1	Q8NEY1	1877 aa		31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	SDR42E1	Q8WUS8	393 aa		31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	CNKSR2	Q8WXI2	1034 aa		31.11	■■■□□ 2.57
TTC3-223	ENST00000492275	HSPA1A	P0DMV8	641 aa	Known RBP	31.1	■■■□□ 2.57
TTC3-223	ENST00000492275	HSPA1B	P0DMV9	641 aa	Known RBP	31.1	■■■□□ 2.57
TTC3-223	ENST00000492275	PCNT	O95613	3336 aa		31.1	■■■□□ 2.57
TTC3-223	ENST00000492275	BAZ2A	Q9UIF9	1905 aa	Known RBP	31.1	■■■□□ 2.57
TTC3-223	ENST00000492275	DDX60L	Q5H9U9	1706 aa	Known RBP	31.1	■■■□□ 2.57
TTC3-223	ENST00000492275	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.09	■■■□□ 2.57
TTC3-223	ENST00000492275	METTL16	Q86W50	562 aa	Known RBP	31.09	■■■□□ 2.57
TTC3-223	ENST00000492275	AIDA	Q96BJ3	306 aa		31.09	■■■□□ 2.57
TTC3-223	ENST00000492275	OPTN	Q96CV9	577 aa		31.09	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms