RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PTCH2Q9Y6C5 1203 aa24.28■■□□□ 1.48
SREBF1-216ENST00000490796 POTEFA5A3E0 1075 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 CXCL11O14625 94 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 GNRH1P01148 92 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 CAP1Q01518 475 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 SCYL3Q8IZE3 742 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 CPA4Q9UI42 421 aa24.27■■□□□ 1.48
SREBF1-216ENST00000490796 GPR75-ASB3A0A0A6YYF3 556 aa24.26■■□□□ 1.47
SREBF1-216ENST00000490796 ECM2O94769 699 aaPredicted RBP24.26■■□□□ 1.47
SREBF1-216ENST00000490796 NOL10Q9BSC4 688 aaKnown RBP24.26■■□□□ 1.47
SREBF1-216ENST00000490796 LRP2BPQ9P2M1 347 aa24.26■■□□□ 1.47
SREBF1-216ENST00000490796 ZHX2Q9Y6X8 837 aa24.26■■□□□ 1.47
SREBF1-216ENST00000490796 ARID4AP29374 1257 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-216ENST00000490796 SLC4A8Q2Y0W8 1093 aa24.25■■□□□ 1.47
SREBF1-216ENST00000490796 TTC39AQ5SRH9 613 aa24.25■■□□□ 1.47
SREBF1-216ENST00000490796 PI16Q6UXB8 463 aa24.25■■□□□ 1.47
SREBF1-216ENST00000490796 TBC1D9Q6ZT07 1266 aa24.25■■□□□ 1.47
SREBF1-216ENST00000490796 PARK7Q99497 189 aaKnown RBP24.25■■□□□ 1.47
SREBF1-216ENST00000490796 ARHGAP39Q9C0H5 1083 aa24.25■■□□□ 1.47
SREBF1-216ENST00000490796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-216ENST00000490796 DDTLA6NHG4 134 aaPredicted RBP24.24■■□□□ 1.47
SREBF1-216ENST00000490796 PHF20L1A8MW92 1017 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 SLC34A2O95436 690 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 MAP4K4O95819 1239 aaPredicted RBP24.24■■□□□ 1.47
SREBF1-216ENST00000490796 HOXD10P28358 340 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 PRMT2P55345 433 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 CCDC158Q5M9N0 1113 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 C17orf99Q6UX52 265 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 SH3BP5LQ7L8J4 393 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 FASTKD5Q7L8L6 764 aaKnown RBP24.24■■□□□ 1.47
SREBF1-216ENST00000490796 ITPRIPQ8IWB1 547 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 DDX4Q9NQI0 724 aaKnown RBP24.24■■□□□ 1.47
SREBF1-216ENST00000490796 HTTP42858 3142 aa24.24■■□□□ 1.47
SREBF1-216ENST00000490796 CTNND1O60716 968 aaKnown RBP24.23■■□□□ 1.47
SREBF1-216ENST00000490796 MIER1Q8N108 512 aa24.23■■□□□ 1.47
SREBF1-216ENST00000490796 NSUN4Q96CB9 384 aaKnown RBP24.23■■□□□ 1.47
SREBF1-216ENST00000490796 DOCK2Q92608 1830 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 RFX7Q2KHR2 1363 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 ATRNL1Q5VV63 1379 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 SURF6O75683 361 aaKnown RBP24.22■■□□□ 1.47
SREBF1-216ENST00000490796 FMNL1O95466 1100 aaPredicted RBP24.22■■□□□ 1.47
SREBF1-216ENST00000490796 PTPRAP18433 802 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 MCAMP43121 646 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 PSMC4P43686 418 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 ATP8B2P98198 1209 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 DIEXFQ68CQ4 756 aaKnown RBP24.22■■□□□ 1.47
SREBF1-216ENST00000490796 GADL1Q6ZQY3 521 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 GPR108Q9NPR9 543 aa24.22■■□□□ 1.47
SREBF1-216ENST00000490796 MYCP01106 439 aaPredicted RBP24.21■■□□□ 1.47
SREBF1-216ENST00000490796 EN2P19622 333 aaPredicted RBP24.21■■□□□ 1.47
SREBF1-216ENST00000490796 RHBDL3P58872 404 aa24.21■■□□□ 1.47
SREBF1-216ENST00000490796 POLA2Q14181 598 aa24.21■■□□□ 1.47
SREBF1-216ENST00000490796 TEX11Q8IYF3 940 aa24.21■■□□□ 1.47
SREBF1-216ENST00000490796 C1orf115Q9H7X2 142 aa24.21■■□□□ 1.47
SREBF1-216ENST00000490796 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.21■■□□□ 1.47
SREBF1-216ENST00000490796 NPM3O75607 178 aaKnown RBP24.2■■□□□ 1.46
SREBF1-216ENST00000490796 MAP3K10Q02779 954 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 TNNI3KQ59H18 835 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 SSH3Q8TE77 659 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 SH3TC2Q8TF17 1288 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 SNRKQ9NRH2 765 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 FPGT-TNNI3KV9GXZ4 949 aa24.2■■□□□ 1.46
SREBF1-216ENST00000490796 A0A0G2JLL6 359 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-216ENST00000490796 BAG3O95817 575 aa24.19■■□□□ 1.46
SREBF1-216ENST00000490796 MOGSQ13724 837 aa24.19■■□□□ 1.46
SREBF1-216ENST00000490796 PRRT2Q7Z6L0 340 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-216ENST00000490796 RAET1EQ8TD07 263 aa24.19■■□□□ 1.46
SREBF1-216ENST00000490796 ZNF384Q8TF68 577 aa24.19■■□□□ 1.46
SREBF1-216ENST00000490796 AFG3L2Q9Y4W6 797 aa24.19■■□□□ 1.46
SREBF1-216ENST00000490796 CENPFP49454 3210 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 TRIM75PA6NK02 468 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 TBC1D12O60347 775 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 CYP2C8P10632 490 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 NAA16Q6N069 864 aaPredicted RBP24.18■■□□□ 1.46
SREBF1-216ENST00000490796 GPAT2Q6NUI2 795 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 TRIM47Q96LD4 638 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 DBNDD2Q9BQY9 259 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 SRRDQ9UH36 339 aa24.18■■□□□ 1.46
SREBF1-216ENST00000490796 SLURP2P0DP57 97 aa24.17■■□□□ 1.46
SREBF1-216ENST00000490796 PLCG2P16885 1265 aa24.17■■□□□ 1.46
SREBF1-216ENST00000490796 FCGRTP55899 365 aa24.17■■□□□ 1.46
SREBF1-216ENST00000490796 SMCR8Q8TEV9 937 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-216ENST00000490796 OSBPL5Q9H0X9 879 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-216ENST00000490796 ADGRA2Q96PE1 1338 aa24.16■■□□□ 1.46
SREBF1-216ENST00000490796 OSBPP22059 807 aa24.16■■□□□ 1.46
SREBF1-216ENST00000490796 MYPNQ86TC9 1320 aa24.15■■□□□ 1.46
SREBF1-216ENST00000490796 FAM196BA6NMK8 535 aa24.15■■□□□ 1.46
SREBF1-216ENST00000490796 SH3RF3Q8TEJ3 882 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-216ENST00000490796 AATFQ9NY61 560 aaKnown RBP eCLIP24.15■■□□□ 1.46
SREBF1-216ENST00000490796 BIN2Q9UBW5 565 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-216ENST00000490796 SLC45A1Q9Y2W3 748 aa24.15■■□□□ 1.46
SREBF1-216ENST00000490796 ZBTB7BO15156 539 aaPredicted RBP24.14■■□□□ 1.45
SREBF1-216ENST00000490796 GCC1Q96CN9 775 aa24.14■■□□□ 1.45
SREBF1-216ENST00000490796 TRIM34Q9BYJ4 488 aa24.14■■□□□ 1.45
SREBF1-216ENST00000490796 BCRP11274 1271 aa24.13■■□□□ 1.45
SREBF1-216ENST00000490796 CTGFP29279 349 aa24.13■■□□□ 1.45
SREBF1-216ENST00000490796 GRK4P32298 578 aa24.13■■□□□ 1.45
SREBF1-216ENST00000490796 CCDC84Q86UT8 332 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-216ENST00000490796 DHX36Q9H2U1 1008 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms