RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ARNTP27540 789 aa8.36□□□□□ -1.07
SMC4-219ENST00000487747 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
SMC4-219ENST00000487747 FLCNQ8NFG4 579 aa8.36□□□□□ -1.07
SMC4-219ENST00000487747 FBXL18Q96ME1 805 aa8.36□□□□□ -1.07
SMC4-219ENST00000487747 FBXO24O75426 580 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 PAGE1O75459 146 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 MAPK8P45983 427 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
SMC4-219ENST00000487747 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 SPRED2Q7Z698 418 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 PLD6Q8N2A8 252 aaKnown RBP8.35□□□□□ -1.07
SMC4-219ENST00000487747 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 GPBAR1Q8TDU6 330 aa8.35□□□□□ -1.07
SMC4-219ENST00000487747 NECAB3Q96P71 396 aaPredicted RBP8.35□□□□□ -1.07
SMC4-219ENST00000487747 NME2P22392 152 aa8.34□□□□□ -1.07
SMC4-219ENST00000487747 BNIP3Q12983 259 aa8.34□□□□□ -1.07
SMC4-219ENST00000487747 RASIP1Q5U651 963 aa8.34□□□□□ -1.07
SMC4-219ENST00000487747 BCL7CQ8WUZ0 217 aaPredicted RBP8.34□□□□□ -1.07
SMC4-219ENST00000487747 ISL2Q96A47 359 aa8.34□□□□□ -1.07
SMC4-219ENST00000487747 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
SMC4-219ENST00000487747 ENC1O14682 589 aa8.33□□□□□ -1.08
SMC4-219ENST00000487747 BMP6P22004 513 aa8.33□□□□□ -1.08
SMC4-219ENST00000487747 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.085e-7■□□□□ 11.2
SMC4-219ENST00000487747 CYP27C1Q4G0S4 372 aa8.33□□□□□ -1.08
SMC4-219ENST00000487747 LCE1DQ5T752 114 aa8.33□□□□□ -1.08
SMC4-219ENST00000487747 CACNA2D2Q9NY47 1150 aa8.33□□□□□ -1.08
SMC4-219ENST00000487747 UBE3DQ7Z6J8 389 aa8.32□□□□□ -1.08
SMC4-219ENST00000487747 DUSP23Q9BVJ7 150 aa8.32□□□□□ -1.08
SMC4-219ENST00000487747 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
SMC4-219ENST00000487747 CSADQ9Y600 493 aa8.32□□□□□ -1.08
SMC4-219ENST00000487747 CD96P40200 585 aa8.31□□□□□ -1.08
SMC4-219ENST00000487747 TXKP42681 527 aa8.31□□□□□ -1.08
SMC4-219ENST00000487747 PCOLCE2Q9UKZ9 415 aa8.31□□□□□ -1.08
SMC4-219ENST00000487747 NTF4P34130 210 aa8.3□□□□□ -1.08
SMC4-219ENST00000487747 PPM1JQ5JR12 505 aa8.3□□□□□ -1.08
SMC4-219ENST00000487747 RNF214Q8ND24 703 aa8.3□□□□□ -1.08
SMC4-219ENST00000487747 SLC5A6Q9Y289 635 aa8.3□□□□□ -1.08
SMC4-219ENST00000487747 DCDC2CA8MYV0 355 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 GSTT1P30711 240 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 ERVK-24P63145 666 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 C12orf40Q86WS4 652 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMC4-219ENST00000487747 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 ASB16Q96NS5 453 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 EMILIN2Q9BXX0 1053 aa8.29□□□□□ -1.08
SMC4-219ENST00000487747 ITGB5P18084 799 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 TOP6BLQ8N6T0 577 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 AGBL5Q8NDL9 886 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 NETO1Q8TDF5 533 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 FBF1Q8TES7 1133 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 HEXIM2Q96MH2 286 aaKnown RBP8.28□□□□□ -1.08
SMC4-219ENST00000487747 SSU72Q9NP77 194 aaKnown RBP8.28□□□□□ -1.08
SMC4-219ENST00000487747 PLAGL2Q9UPG8 496 aa8.28□□□□□ -1.08
SMC4-219ENST00000487747 P4HBP07237 508 aaKnown RBP8.27□□□□□ -1.09
SMC4-219ENST00000487747 CELA3AP09093 270 aa8.27□□□□□ -1.09
SMC4-219ENST00000487747 CD8BP10966 210 aa8.27□□□□□ -1.09
SMC4-219ENST00000487747 OXCT1P55809 520 aa8.27□□□□□ -1.09
SMC4-219ENST00000487747 FAM214BQ7L5A3 538 aa8.27□□□□□ -1.09
SMC4-219ENST00000487747 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
SMC4-219ENST00000487747 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
SMC4-219ENST00000487747 PTPN11Q06124 597 aaPredicted RBP8.26□□□□□ -1.09
SMC4-219ENST00000487747 RING1Q06587 406 aa8.26□□□□□ -1.09
SMC4-219ENST00000487747 PLCL1Q15111 1095 aa8.26□□□□□ -1.09
SMC4-219ENST00000487747 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
SMC4-219ENST00000487747 ADAMTS6Q9UKP5 1117 aa8.26□□□□□ -1.09
SMC4-219ENST00000487747 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
SMC4-219ENST00000487747 CEP44Q9C0F1 390 aa8.25□□□□□ -1.09
SMC4-219ENST00000487747 SRCIN1Q9C0H9 1055 aa8.25□□□□□ -1.09
SMC4-219ENST00000487747 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
SMC4-219ENST00000487747 TRIM37O94972 964 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 PAPLNO95428 1278 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 ITIH2P19823 946 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.092e-22■■■■■ 68.1
SMC4-219ENST00000487747 OGFOD2Q6N063 350 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 LLGL2Q6P1M3 1020 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 STK11IPQ8N1F8 1099 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 PCDHA4Q9UN74 947 aa8.24□□□□□ -1.09
SMC4-219ENST00000487747 CEACAM5P06731 702 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 FUT4P22083 530 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 KCNA1Q09470 495 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 INPP5AQ14642 412 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 AOC3Q16853 763 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 ZBTB37Q5TC79 503 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 MISP3Q96FF7 219 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 C12orf49Q9H741 205 aa8.23□□□□□ -1.09
SMC4-219ENST00000487747 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
SMC4-219ENST00000487747 CDK8P49336 464 aa8.22□□□□□ -1.09
SMC4-219ENST00000487747 PRKCQQ04759 706 aa8.22□□□□□ -1.09
SMC4-219ENST00000487747 IFI16Q16666 785 aaKnown RBP8.22□□□□□ -1.09
SMC4-219ENST00000487747 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.22□□□□□ -1.09
SMC4-219ENST00000487747 MKNK2Q9HBH9 465 aa8.22□□□□□ -1.09
SMC4-219ENST00000487747 MBNL3Q9NUK0 354 aaKnown RBP8.22□□□□□ -1.09
SMC4-219ENST00000487747 VAV3Q9UKW4 847 aa8.22□□□□□ -1.09
SMC4-219ENST00000487747 GIPC1O14908 333 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 LDHBP07195 334 aaKnown RBP8.21□□□□□ -1.1
SMC4-219ENST00000487747 JUNBP17275 347 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms