RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PICK1Q9NRD5 415 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 GGT7Q9UJ14 662 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 CSADQ9Y600 493 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.85□□□□□ -1.31
TTC3-220ENST00000487711 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 HMX2A2RU54 273 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 DCDC2CA8MYV0 355 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
TTC3-220ENST00000487711 LDLRAD1Q5T700 205 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
TTC3-220ENST00000487711 GAL3ST3Q96A11 431 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 ELMO3Q96BJ8 720 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 TMEM74Q96NL1 305 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
TTC3-220ENST00000487711 DISC1Q9NRI5 854 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 KBTBD4Q9NVX7 518 aa6.85□□□□□ -1.31
TTC3-220ENST00000487711 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 RECKO95980 971 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 NFICP08651 508 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 ZNF76P36508 570 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 ERVK-24P63145 666 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 TTLL4Q14679 1199 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 NFKBIBQ15653 356 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 PAOXQ6QHF9 649 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
TTC3-220ENST00000487711 ERMP1Q7Z2K6 904 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 HDXQ7Z353 690 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
TTC3-220ENST00000487711 ZNF428Q96B54 188 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 COPRSQ9NQ92 184 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
TTC3-220ENST00000487711 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
TTC3-220ENST00000487711 PF4P02776 101 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
TTC3-220ENST00000487711 FSTP19883 344 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
TTC3-220ENST00000487711 CAMK2GQ13555 558 aaPredicted RBP6.83□□□□□ -1.32
TTC3-220ENST00000487711 MAP7Q14244 749 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 INPP5AQ14642 412 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 PPM1JQ5JR12 505 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
TTC3-220ENST00000487711 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 PLPPR2Q96GM1 343 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 SEMA6CQ9H3T2 930 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 ACSS3Q9H6R3 686 aa6.83□□□□□ -1.32
TTC3-220ENST00000487711 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
TTC3-220ENST00000487711 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
TTC3-220ENST00000487711 LMNB2Q03252 620 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 FAM160A1Q05DH4 1040 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 PRSS36Q5K4E3 855 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 SNAP47Q5SQN1 464 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
TTC3-220ENST00000487711 RNF214Q8ND24 703 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 EZH1Q92800 747 aaPredicted RBP6.82□□□□□ -1.32
TTC3-220ENST00000487711 LGR6Q9HBX8 967 aa6.82□□□□□ -1.32
TTC3-220ENST00000487711 METTL5Q9NRN9 209 aaKnown RBP6.82□□□□□ -1.32
TTC3-220ENST00000487711 GSC2O15499 205 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 ADAM23O75077 832 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 CDK8P49336 464 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 FANCCQ00597 558 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 NFIAQ12857 509 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 RNF43Q68DV7 783 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 BNC2Q6ZN30 1099 aaPredicted RBP6.81□□□□□ -1.32
TTC3-220ENST00000487711 CCDC84Q86UT8 332 aaPredicted RBP6.81□□□□□ -1.32
TTC3-220ENST00000487711 RNF34Q969K3 372 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 RHOVQ96L33 236 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 SNCAIPQ9Y6H5 919 aa6.81□□□□□ -1.32
TTC3-220ENST00000487711 BPNT1O95861 308 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 IGLV1-40P01703 118 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 NEFMP07197 916 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 FBXL6Q8N531 539 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 GOLM1Q8NBJ4 401 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 ISL2Q96A47 359 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
TTC3-220ENST00000487711 FANCGO15287 622 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 F13A1P00488 732 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 EIF4A3P38919 411 aaKnown RBP6.79□□□□□ -1.32
TTC3-220ENST00000487711 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
TTC3-220ENST00000487711 ZBTB37Q5TC79 503 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 CDC37L1Q7L3B6 337 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 CYFIP1Q7L576 1253 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 SLC51AQ86UW1 340 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
TTC3-220ENST00000487711 GATAD2BQ8WXI9 593 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
TTC3-220ENST00000487711 DYNC1LI2O43237 492 aaPredicted RBP6.78□□□□□ -1.32
TTC3-220ENST00000487711 ETF1P62495 437 aaKnown RBP6.78□□□□□ -1.32
TTC3-220ENST00000487711 RING1Q06587 406 aa6.78□□□□□ -1.32
TTC3-220ENST00000487711 FBXL19Q6PCT2 694 aa6.78□□□□□ -1.32
TTC3-220ENST00000487711 USP48Q86UV5 1035 aa6.78□□□□□ -1.32
TTC3-220ENST00000487711 GIMAP7Q8NHV1 300 aa6.78□□□□□ -1.32
TTC3-220ENST00000487711 PRKAG2Q9UGJ0 569 aa6.78□□□□□ -1.32
TTC3-220ENST00000487711 SUPT16HQ9Y5B9 1047 aaKnown RBP6.78□□□□□ -1.32
TTC3-220ENST00000487711 FAM221AA4D161 298 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms