RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CNOT7Q9UIV1 285 aaKnown RBP8.3□□□□□ -1.08
UBR4-214ENST00000486515 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
UBR4-214ENST00000486515 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 H0YGN5 161 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 SGSM2O43147 1006 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 GPAA1O43292 621 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 EPB41L2O43491 1005 aaKnown RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 NOGQ13253 232 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 CFAP100Q494V2 611 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBR4-214ENST00000486515 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 TEX11Q8IYF3 940 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 FAM163AQ96GL9 167 aaPredicted RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 ARMT1Q9H993 441 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 ZNF287Q9HBT7 754 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 MYOZ2Q9NPC6 264 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 ATP8A2Q9NTI2 1148 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 USP40Q9NVE5 1235 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 RBM27Q9P2N5 1060 aaKnown RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 U3KPZ7 1027 aaPredicted RBP8.29□□□□□ -1.08
UBR4-214ENST00000486515 DUOX1Q9NRD9 1551 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 BRCA2P51587 3418 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
UBR4-214ENST00000486515 RPAP1Q9BWH6 1393 aaPredicted RBP8.28□□□□□ -1.08
UBR4-214ENST00000486515 GPR75-ASB3A0A0A6YYF3 556 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 A0A0D9SFI3 127 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
UBR4-214ENST00000486515 ZNF213O14771 459 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 POLR3DP05423 398 aaPredicted RBP8.28□□□□□ -1.08
UBR4-214ENST00000486515 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 TRDNQ13061 729 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 CERS5Q8N5B7 392 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 ZDHHC15Q96MV8 337 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 DSCC1Q9BVC3 393 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 PUS7LQ9H0K6 701 aaKnown RBP8.28□□□□□ -1.08
UBR4-214ENST00000486515 VEZTQ9HBM0 779 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 ADARB2Q9NS39 739 aaKnown RBP8.28□□□□□ -1.08
UBR4-214ENST00000486515 DAGLAQ9Y4D2 1042 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 AK9Q5TCS8 1911 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 ZNF541Q9H0D2 1346 aa8.28□□□□□ -1.08
UBR4-214ENST00000486515 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.08
UBR4-214ENST00000486515 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 POTEFA5A3E0 1075 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 M0R2C6 588 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 TRAF5O00463 557 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 TRPA1O75762 1119 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 PPP4CP60510 307 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 PICALMQ13492 652 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 KRT32Q14532 448 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 C8orf34Q49A92 452 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 GIMAP6Q6P9H5 292 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 DCPSQ96C86 337 aaKnown RBP8.27□□□□□ -1.09
UBR4-214ENST00000486515 HOOK2Q96ED9 719 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 STRBPQ96SI9 672 aaKnown RBP8.27□□□□□ -1.09
UBR4-214ENST00000486515 SEC62Q99442 399 aaKnown RBP8.27□□□□□ -1.09
UBR4-214ENST00000486515 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 GPRC5DQ9NZD1 345 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 GAKO14976 1311 aa8.27□□□□□ -1.09
UBR4-214ENST00000486515 COL1A1P02452 1464 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 CEP290O15078 2479 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 SPDYE2BA6NHP3 402 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 SPDYE6P0CI01 402 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 HSPD1P10809 573 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 PSMA5P28066 241 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 DYNLL1P63167 89 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 TBC1D10BQ4KMP7 808 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 CCDC129Q6ZRS4 1044 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 RALYLQ86SE5 291 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 LCORLQ8N3X6 602 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 CRACR2BQ8N4Y2 399 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 SH3RF3Q8TEJ3 882 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 C22orf23Q9BZE7 217 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 DHX36Q9H2U1 1008 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 RNF41Q9H4P4 317 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 TDRD3Q9H7E2 651 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 RNF186Q9NXI6 227 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 MCM9Q9NXL9 1143 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 ARPP21Q9UBL0 812 aaPredicted RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 STXBP5LQ9Y2K9 1186 aa8.26□□□□□ -1.09
UBR4-214ENST00000486515 MYO5AQ9Y4I1 1855 aaKnown RBP8.26□□□□□ -1.09
UBR4-214ENST00000486515 ADAMTSL1Q8N6G6 1762 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 ZNF646O15015 1829 aaPredicted RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 NF2P35240 595 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 ZNF280AP59817 542 aaPredicted RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 FGD1P98174 961 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 PDE4BQ07343 736 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms