RNA–Protein interactions for RNA: ENST00000486310.5

ARF4-204, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 1,601 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-204ENST00000486310 USP40Q9NVE5 1235 aa8.34□□□□□ -1.07
ARF4-204ENST00000486310 SBF1O95248 1867 aa8.34□□□□□ -1.07
ARF4-204ENST00000486310 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 E7EWF7 191 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 PCP11498 1178 aaKnown RBP8.33□□□□□ -1.08
ARF4-204ENST00000486310 YBX3P16989 372 aaKnown RBP eCLIP8.33□□□□□ -1.084e-13■□□□□ 8.3
ARF4-204ENST00000486310 HAND2P61296 217 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 PPARAQ07869 468 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 DLGAP5Q15398 846 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 ADCK5Q3MIX3 580 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 CFAP100Q494V2 611 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 SBK1Q52WX2 424 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
ARF4-204ENST00000486310 RUFY3Q7L099 469 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 GMLQ99445 158 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 MCM9Q9NXL9 1143 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 TMOD2Q9NZR1 351 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
ARF4-204ENST00000486310 FOCADQ5VW36 1801 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 ECM29Q5VYK3 1845 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
ARF4-204ENST00000486310 CDK5RAP2Q96SN8 1893 aa8.33□□□□□ -1.08
ARF4-204ENST00000486310 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 USP17L21D6R901 530 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 MYO1BO43795 1136 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
ARF4-204ENST00000486310 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 NT5C2P49902 561 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 RHBDL3P58872 404 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 ANKRD1Q15327 319 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 CTR9Q6PD62 1173 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
ARF4-204ENST00000486310 MAPKAPK5Q8IW41 473 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 DPF2Q92785 391 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 UPF3BQ9BZI7 483 aaKnown RBP8.32□□□□□ -1.08
ARF4-204ENST00000486310 KRT23Q9C075 422 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 LAMB1P07942 1786 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 FLT1P17948 1338 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 MYH1P12882 1939 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 PRELPP51888 382 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 FGD1P98174 961 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 PDE4BQ07343 736 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 GPC2Q8N158 579 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 MTMR14Q8NCE2 650 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 ALDH8A1Q9H2A2 487 aaPredicted RBP8.32□□□□□ -1.08
ARF4-204ENST00000486310 RNF181Q9P0P0 153 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
ARF4-204ENST00000486310 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
ARF4-204ENST00000486310 ADAMTSL1Q8N6G6 1762 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 H7C1D1 291 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 K7ELQ4 463 aaPredicted RBP8.31□□□□□ -1.08
ARF4-204ENST00000486310 WDHD1O75717 1129 aaPredicted RBP8.31□□□□□ -1.08
ARF4-204ENST00000486310 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 MCM5P33992 734 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 CTDSPL2Q05D32 466 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 PICALMQ13492 652 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 C12orf60Q5U649 245 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 C9orf131Q5VYM1 1079 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 TBC1D10CQ8IV04 446 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 PRMT6Q96LA8 375 aaPredicted RBP8.31□□□□□ -1.08
ARF4-204ENST00000486310 IDI2Q9BXS1 227 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
ARF4-204ENST00000486310 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 WDR19Q8NEZ3 1342 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 ZNF541Q9H0D2 1346 aa8.31□□□□□ -1.08
ARF4-204ENST00000486310 HSP90AA1P07900 732 aaKnown RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 ZNF280AP59817 542 aaPredicted RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 SART3Q15020 963 aaKnown RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 MICALL2Q8IY33 904 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 ESR2Q92731 530 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 ZSCAN31Q96LW9 406 aaPredicted RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 TTC14Q96N46 770 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 OSBPL5Q9H0X9 879 aaPredicted RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 TDRD3Q9H7E2 651 aaKnown RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 CNOT7Q9UIV1 285 aaKnown RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 TAF6LQ9Y6J9 622 aa8.3□□□□□ -1.08
ARF4-204ENST00000486310 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
ARF4-204ENST00000486310 ROBO3Q96MS0 1386 aa8.29□□□□□ -1.08
ARF4-204ENST00000486310 ERICH2A1L162 156 aa8.29□□□□□ -1.08
ARF4-204ENST00000486310 ENTPD3O75355 529 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms