RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RASA3Q14644 834 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 ZMYM1Q5SVZ6 1142 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 ZSCAN29Q8IWY8 852 aaPredicted RBP13.68□□□□□ -0.22
NUP50-216ENST00000486184 LCORLQ8N3X6 602 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 RUFY2Q8WXA3 655 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
NUP50-216ENST00000486184 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
NUP50-216ENST00000486184 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 M0R2C6 588 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 GPAA1O43292 621 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 GNAT2P19087 354 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 NFIAQ12857 509 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
NUP50-216ENST00000486184 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 CWC27Q6UX04 472 aaKnown RBP13.67□□□□□ -0.22
NUP50-216ENST00000486184 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 AMOTL1Q8IY63 956 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 FAM151AQ8WW52 585 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 HOOK2Q96ED9 719 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 SLC4A4Q9Y6R1 1079 aa13.67□□□□□ -0.22
NUP50-216ENST00000486184 RPAP1Q9BWH6 1393 aaPredicted RBP13.67□□□□□ -0.22
NUP50-216ENST00000486184 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
NUP50-216ENST00000486184 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
NUP50-216ENST00000486184 APPP05067 770 aa13.66□□□□□ -0.22
NUP50-216ENST00000486184 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
NUP50-216ENST00000486184 FAM227BQ96M60 508 aa13.66□□□□□ -0.22
NUP50-216ENST00000486184 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
NUP50-216ENST00000486184 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
NUP50-216ENST00000486184 FLT1P17948 1338 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 TRAF5O00463 557 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
NUP50-216ENST00000486184 SEC62Q99442 399 aaKnown RBP13.65□□□□□ -0.22
NUP50-216ENST00000486184 TRIM34Q9BYJ4 488 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
NUP50-216ENST00000486184 DDX4Q9NQI0 724 aaKnown RBP13.65□□□□□ -0.22
NUP50-216ENST00000486184 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 FAM198AQ9UFP1 575 aa13.65□□□□□ -0.22
NUP50-216ENST00000486184 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
NUP50-216ENST00000486184 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 RAD50Q92878 1312 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 CDC45O75419 566 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
NUP50-216ENST00000486184 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
NUP50-216ENST00000486184 CHMLP26374 656 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 CCDC129Q6ZRS4 1044 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 SDR42E1Q8WUS8 393 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
NUP50-216ENST00000486184 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
NUP50-216ENST00000486184 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
NUP50-216ENST00000486184 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
NUP50-216ENST00000486184 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 PRKAB2O43741 272 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 POLR3DP05423 398 aaPredicted RBP13.63□□□□□ -0.23
NUP50-216ENST00000486184 TDO2P48775 406 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 DCAF15Q66K64 600 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 MCM9Q9NXL9 1143 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 OTOFQ9HC10 1997 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
NUP50-216ENST00000486184 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 PATL2C9JE40 543 aaKnown RBP13.62□□□□□ -0.23
NUP50-216ENST00000486184 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
NUP50-216ENST00000486184 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
NUP50-216ENST00000486184 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
NUP50-216ENST00000486184 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 NAPBQ9H115 298 aa13.62□□□□□ -0.23
NUP50-216ENST00000486184 DCP1AQ9NPI6 582 aaPredicted RBP13.62□□□□□ -0.23
NUP50-216ENST00000486184 DDTLA6NHG4 134 aaPredicted RBP13.61□□□□□ -0.23
NUP50-216ENST00000486184 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 FMR1Q06787 632 aaKnown RBP eCLIP13.61□□□□□ -0.23
NUP50-216ENST00000486184 PRKG1Q13976 671 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 GBA2Q9HCG7 927 aaPredicted RBP13.61□□□□□ -0.23
NUP50-216ENST00000486184 PI4KBQ9UBF8 816 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 ARPP21Q9UBL0 812 aaPredicted RBP13.61□□□□□ -0.23
NUP50-216ENST00000486184 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 DOCK1Q14185 1865 aa13.61□□□□□ -0.23
NUP50-216ENST00000486184 SSC5DA1L4H1 1573 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms