RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 CACNB3P54284 484 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 PABPC4Q13310 644 aaKnown RBP eCLIP9.14□□□□□ -0.957e-7■■■□□ 14.8
CPNE1-226ENST00000486021 RASGRF1Q13972 1273 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 NOL9Q5SY16 702 aaKnown RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 NAA16Q6N069 864 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 ZNF512BQ96KM6 892 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 GINM1Q9NU53 330 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 CDK5RAP2Q96SN8 1893 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 TLR2O60603 784 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 HLA-DOAP06340 250 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 RGS3P49796 1198 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 MECOMQ03112 1051 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 CRHR2Q13324 411 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 POLA2Q14181 598 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 GRIK5Q16478 980 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 TNNI3KQ59H18 835 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 MIGA2Q7L4E1 593 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 SCYL3Q8IZE3 742 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 CLASRPQ8N2M8 674 aaKnown RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 MS4A4AQ96JQ5 239 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 PARK7Q99497 189 aaKnown RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 HMG20BQ9P0W2 317 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 HERC5Q9UII4 1024 aaKnown RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 NOP58Q9Y2X3 529 aaKnown RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 FPGT-TNNI3KV9GXZ4 949 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 PTPRFP10586 1907 aa9.13□□□□□ -0.95
CPNE1-226ENST00000486021 MYO5AQ9Y4I1 1855 aaKnown RBP9.13□□□□□ -0.95
CPNE1-226ENST00000486021 MYH7P12883 1935 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 IRF6O14896 467 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 RAB11FIP3O75154 756 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 ADORA1P30542 326 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 MAP3K12Q12852 859 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 PICALMQ13492 652 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 OTOP1Q7RTM1 612 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
CPNE1-226ENST00000486021 ZKSCAN4Q969J2 545 aaPredicted RBP9.12□□□□□ -0.95
CPNE1-226ENST00000486021 KIF1BPQ96EK5 621 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 PI4KBQ9UBF8 816 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 PTPN22Q9Y2R2 807 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 SLC45A1Q9Y2W3 748 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 SNCAIPQ9Y6H5 919 aa9.12□□□□□ -0.95
CPNE1-226ENST00000486021 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 SLC9C1Q4G0N8 1177 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 FOXP4Q8IVH2 680 aaPredicted RBP9.11□□□□□ -0.95
CPNE1-226ENST00000486021 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 BRI3BPQ8WY22 251 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 NSUN4Q96CB9 384 aaKnown RBP9.11□□□□□ -0.95
CPNE1-226ENST00000486021 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 KCNH4Q9UQ05 1017 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 ATRNL1Q5VV63 1379 aa9.11□□□□□ -0.95
CPNE1-226ENST00000486021 PHIPQ8WWQ0 1821 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 BTBD19C9JJ37 291 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 PDHXO00330 501 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 ASNSP08243 561 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 IFIT2P09913 472 aaKnown RBP9.1□□□□□ -0.95
CPNE1-226ENST00000486021 OSBPP22059 807 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 INPP5BP32019 993 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 GJA5P36382 358 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 MCAMP43121 646 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 TTC6Q86TZ1 520 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 CD99L2Q8TCZ2 262 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 PTPN18Q99952 460 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
CPNE1-226ENST00000486021 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 ZHX2Q9Y6X8 837 aa9.1□□□□□ -0.95
CPNE1-226ENST00000486021 AOX1Q06278 1338 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 C19orf81C9J6K1 198 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 PTPRAP18433 802 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 USP5P45974 858 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 FCGRTP55899 365 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 PPP4CP60510 307 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 UBXN2AP68543 259 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 LACTBP83111 547 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 NFIAQ12857 509 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 LRRFIP1Q32MZ4 808 aaKnown RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 ZSCAN25Q6NSZ9 544 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 CEP85Q6P2H3 762 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 GADL1Q6ZQY3 521 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 FAM43AQ8N2R8 423 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms