RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 SBK1Q52WX2 424 aa24.73■■□□□ 1.55
RXRB-204ENST00000483281 TAF1DQ9H5J8 278 aaPredicted RBP24.73■■□□□ 1.55
RXRB-204ENST00000483281 MYH1P12882 1939 aa24.72■■□□□ 1.55
RXRB-204ENST00000483281 BAZ2AQ9UIF9 1905 aaKnown RBP24.72■■□□□ 1.55
RXRB-204ENST00000483281 FAM83AQ86UY5 434 aa24.72■■□□□ 1.55
RXRB-204ENST00000483281 PNMA8AQ86V59 439 aaPredicted RBP24.72■■□□□ 1.55
RXRB-204ENST00000483281 ZC3H15Q8WU90 426 aaKnown RBP24.72■■□□□ 1.55
RXRB-204ENST00000483281 FAM198AQ9UFP1 575 aa24.72■■□□□ 1.55
RXRB-204ENST00000483281 PGAP2Q9UHJ9 254 aa24.72■■□□□ 1.55
RXRB-204ENST00000483281 RBM8AQ9Y5S9 174 aaKnown RBP24.72■■□□□ 1.55
RXRB-204ENST00000483281 FLT1P17948 1338 aa24.72■■□□□ 1.55
RXRB-204ENST00000483281 VEGFAP15692 232 aaPredicted RBP24.71■■□□□ 1.55
RXRB-204ENST00000483281 NAPBQ9H115 298 aa24.71■■□□□ 1.55
RXRB-204ENST00000483281 DDX4Q9NQI0 724 aaKnown RBP24.71■■□□□ 1.55
RXRB-204ENST00000483281 NFIAQ12857 509 aa24.71■■□□□ 1.55
RXRB-204ENST00000483281 MAPKAPK5Q8IW41 473 aa24.71■■□□□ 1.55
RXRB-204ENST00000483281 UPF2Q9HAU5 1272 aaKnown RBP24.71■■□□□ 1.55
RXRB-204ENST00000483281 PITPNM2Q9BZ72 1349 aa24.71■■□□□ 1.55
RXRB-204ENST00000483281 NAV1Q8NEY1 1877 aa24.7■■□□□ 1.54
RXRB-204ENST00000483281 CLRN2A0PK11 232 aa24.7■■□□□ 1.54
RXRB-204ENST00000483281 OSBPL5Q9H0X9 879 aaPredicted RBP24.7■■□□□ 1.54
RXRB-204ENST00000483281 COL2A1P02458 1487 aaPredicted RBP24.69■■□□□ 1.54
RXRB-204ENST00000483281 HSPA4P34932 840 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 TDO2P48775 406 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 TNFAIP1Q13829 316 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 CTR9Q6PD62 1173 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 FAM151AQ8WW52 585 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 KCNB2Q92953 911 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 ARPP21Q9UBL0 812 aaPredicted RBP24.69■■□□□ 1.54
RXRB-204ENST00000483281 POLR2AP24928 1970 aaKnown RBP24.69■■□□□ 1.54
RXRB-204ENST00000483281 TNNI2P48788 182 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 CACNB3P54284 484 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 DHX36Q9H2U1 1008 aaKnown RBP24.69■■□□□ 1.54
RXRB-204ENST00000483281 RRAGCQ9HB90 399 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 MCM9Q9NXL9 1143 aa24.69■■□□□ 1.54
RXRB-204ENST00000483281 DDX60LQ5H9U9 1706 aaKnown RBP24.68■■□□□ 1.54
RXRB-204ENST00000483281 USP17L12C9JPN9 530 aa24.68■■□□□ 1.54
RXRB-204ENST00000483281 USP17L21D6R901 530 aa24.68■■□□□ 1.54
RXRB-204ENST00000483281 APOBEC3FQ8IUX4 373 aaKnown RBP24.68■■□□□ 1.54
RXRB-204ENST00000483281 ANAPC4Q9UJX5 808 aa24.68■■□□□ 1.54
RXRB-204ENST00000483281 PICALMQ13492 652 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 VEZTQ9HBM0 779 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 CNTNAP1P78357 1384 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 MCCP23508 829 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 IMMTQ16891 758 aaKnown RBP24.67■■□□□ 1.54
RXRB-204ENST00000483281 TSGA10IPQ3SY00 556 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 C12orf60Q5U649 245 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 RNF20Q5VTR2 975 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 AMOTL1Q8IY63 956 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 TAOK2Q9UL54 1235 aa24.67■■□□□ 1.54
RXRB-204ENST00000483281 TCP10L2B9ZVM9 353 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 ZNF213O14771 459 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 ANGEL2Q5VTE6 544 aaKnown RBP24.66■■□□□ 1.54
RXRB-204ENST00000483281 CREB3L3Q68CJ9 461 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 TTC6Q86TZ1 520 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 ATRNL1Q5VV63 1379 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 LAMA4Q16363 1823 aa24.66■■□□□ 1.54
RXRB-204ENST00000483281 ASTN2O75129 1339 aaPredicted RBP24.66■■□□□ 1.54
RXRB-204ENST00000483281 ZFPM1Q8IX07 1006 aa24.65■■□□□ 1.54
RXRB-204ENST00000483281 SLC27A2O14975 620 aa24.65■■□□□ 1.54
RXRB-204ENST00000483281 POLR3DP05423 398 aaPredicted RBP24.65■■□□□ 1.54
RXRB-204ENST00000483281 RBM25P49756 843 aaKnown RBP24.65■■□□□ 1.54
RXRB-204ENST00000483281 C22orf23Q9BZE7 217 aa24.65■■□□□ 1.54
RXRB-204ENST00000483281 CYP21A2P08686 494 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 TCP10Q12799 353 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 IL17RAQ96F46 866 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 GGA3Q9NZ52 723 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 PALD1Q9ULE6 856 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 PPP2R3BQ9Y5P8 575 aa24.64■■□□□ 1.54
RXRB-204ENST00000483281 LAMB1P07942 1786 aa24.64■■□□□ 1.53
RXRB-204ENST00000483281 ANAPC15P60006 121 aa24.63■■□□□ 1.53
RXRB-204ENST00000483281 PPARAQ07869 468 aa24.63■■□□□ 1.53
RXRB-204ENST00000483281 DCPSQ96C86 337 aaKnown RBP24.63■■□□□ 1.53
RXRB-204ENST00000483281 RASA3Q14644 834 aa24.63■■□□□ 1.53
RXRB-204ENST00000483281 SH3BP5LQ7L8J4 393 aa24.63■■□□□ 1.53
RXRB-204ENST00000483281 PI4KBQ9UBF8 816 aa24.63■■□□□ 1.53
RXRB-204ENST00000483281 SAP30BPQ9UHR5 308 aaKnown RBP24.63■■□□□ 1.53
RXRB-204ENST00000483281 MINDY4BA8MYZ0 360 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 ZKSCAN1P17029 563 aaPredicted RBP24.62■■□□□ 1.53
RXRB-204ENST00000483281 METTL16Q86W50 562 aaKnown RBP24.62■■□□□ 1.53
RXRB-204ENST00000483281 FOXP4Q8IVH2 680 aaPredicted RBP24.62■■□□□ 1.53
RXRB-204ENST00000483281 DEFB129Q9H1M3 183 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 EHD4Q9H223 541 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 DDTLA6NHG4 134 aaPredicted RBP24.62■■□□□ 1.53
RXRB-204ENST00000483281 PLCD1P51178 756 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 TBC1D32Q96NH3 1257 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 NMRK2Q9NPI5 230 aa24.62■■□□□ 1.53
RXRB-204ENST00000483281 ROBO3Q96MS0 1386 aa24.61■■□□□ 1.53
RXRB-204ENST00000483281 HLA-DOAP06340 250 aa24.61■■□□□ 1.53
RXRB-204ENST00000483281 FGRP09769 529 aa24.61■■□□□ 1.53
RXRB-204ENST00000483281 PCP11498 1178 aaKnown RBP24.61■■□□□ 1.53
RXRB-204ENST00000483281 SLC3A2P08195 630 aaKnown RBP24.6■■□□□ 1.53
RXRB-204ENST00000483281 EAPPQ56P03 285 aaPredicted RBP24.6■■□□□ 1.53
RXRB-204ENST00000483281 RASEFQ8IZ41 740 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 TEPSINQ96N21 525 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 CYP2D7A0A087X1C5 515 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 CYP2D6P10635 497 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 KRT32Q14532 448 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 TMEM39BQ9GZU3 492 aa24.6■■□□□ 1.53
RXRB-204ENST00000483281 NBPF3Q9H094 633 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms