RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 KIF1BPQ96EK5 621 aa28.76■■■□□ 2.19
RHBDF1-208ENST00000482904 LAMB1P07942 1786 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 GPR25O00155 361 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 INPP5BP32019 993 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 GTF2A2P52657 109 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 SIRT2Q8IXJ6 389 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 CLASRPQ8N2M8 674 aaKnown RBP28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 ZNF296Q8WUU4 475 aaPredicted RBP28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 CFHR5Q9BXR6 569 aa28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 DDX4Q9NQI0 724 aaKnown RBP28.75■■■□□ 2.19
RHBDF1-208ENST00000482904 DOCK2Q92608 1830 aa28.74■■■□□ 2.19
RHBDF1-208ENST00000482904 CCL15-CCL14A0A0B4J2E2 113 aa28.74■■■□□ 2.19
RHBDF1-208ENST00000482904 RHBDL3P58872 404 aa28.74■■■□□ 2.19
RHBDF1-208ENST00000482904 CCL15Q16663 113 aa28.74■■■□□ 2.19
RHBDF1-208ENST00000482904 MAP4K4O95819 1239 aaPredicted RBP28.73■■■□□ 2.19
RHBDF1-208ENST00000482904 CTU1Q7Z7A3 348 aaKnown RBP28.73■■■□□ 2.19
RHBDF1-208ENST00000482904 TEX11Q8IYF3 940 aa28.73■■■□□ 2.19
RHBDF1-208ENST00000482904 AK9Q5TCS8 1911 aa28.73■■■□□ 2.19
RHBDF1-208ENST00000482904 BAG3O95817 575 aa28.72■■■□□ 2.19
RHBDF1-208ENST00000482904 IFIT2P09913 472 aaKnown RBP28.72■■■□□ 2.19
RHBDF1-208ENST00000482904 NOM1Q5C9Z4 860 aaKnown RBP28.72■■■□□ 2.19
RHBDF1-208ENST00000482904 MS4A4AQ96JQ5 239 aa28.72■■■□□ 2.19
RHBDF1-208ENST00000482904 PIH1D3Q9NQM4 214 aaKnown RBP28.72■■■□□ 2.19
RHBDF1-208ENST00000482904 TESPA1A2RU30 521 aaPredicted RBP28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 DDTLA6NHG4 134 aaPredicted RBP28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 RAB11FIP3O75154 756 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 IDH1O75874 414 aaKnown RBP28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 PPIL2Q13356 520 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 SH3BP5LQ7L8J4 393 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 BRI3BPQ8WY22 251 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 R3HDMLQ9H3Y0 253 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 AATFQ9NY61 560 aaKnown RBP eCLIP28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 ATRNL1Q5VV63 1379 aa28.71■■■□□ 2.19
RHBDF1-208ENST00000482904 FKTNO75072 461 aa28.7■■■□□ 2.18
RHBDF1-208ENST00000482904 SNAPC2Q13487 334 aa28.7■■■□□ 2.18
RHBDF1-208ENST00000482904 SH3RF3Q8TEJ3 882 aaPredicted RBP28.7■■■□□ 2.18
RHBDF1-208ENST00000482904 PTPN18Q99952 460 aa28.7■■■□□ 2.18
RHBDF1-208ENST00000482904 ZNF112Q9UJU3 913 aa28.7■■■□□ 2.18
RHBDF1-208ENST00000482904 CCDC85CA6NKD9 419 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 IRF6O14896 467 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 IGSF3O75054 1194 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 CETPP11597 493 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 PLCG2P16885 1265 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 PPATQ06203 517 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 CRHR2Q13324 411 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 NDUFB9Q9Y6M9 179 aa28.69■■■□□ 2.18
RHBDF1-208ENST00000482904 NPM3O75607 178 aaKnown RBP28.68■■■□□ 2.18
RHBDF1-208ENST00000482904 NOL9Q5SY16 702 aaKnown RBP28.68■■■□□ 2.18
RHBDF1-208ENST00000482904 OSBPL5Q9H0X9 879 aaPredicted RBP28.68■■■□□ 2.18
RHBDF1-208ENST00000482904 PICK1Q9NRD5 415 aa28.67■■■□□ 2.18
RHBDF1-208ENST00000482904 COL2A1P02458 1487 aaPredicted RBP28.66■■■□□ 2.18
RHBDF1-208ENST00000482904 CYP7A1P22680 504 aa28.66■■■□□ 2.18
RHBDF1-208ENST00000482904 TAF1CQ15572 869 aaPredicted RBP28.66■■■□□ 2.18
RHBDF1-208ENST00000482904 ADGRA1Q86SQ6 560 aa28.66■■■□□ 2.18
RHBDF1-208ENST00000482904 MAP3K12Q12852 859 aa28.65■■■□□ 2.18
RHBDF1-208ENST00000482904 SCYL3Q8IZE3 742 aa28.65■■■□□ 2.18
RHBDF1-208ENST00000482904 FAM43AQ8N2R8 423 aa28.64■■■□□ 2.18
RHBDF1-208ENST00000482904 MAGEB6Q8N7X4 407 aa28.64■■■□□ 2.18
RHBDF1-208ENST00000482904 DNAJC2Q99543 621 aaKnown RBP28.64■■■□□ 2.18
RHBDF1-208ENST00000482904 ANTXR1Q9H6X2 564 aa28.64■■■□□ 2.18
RHBDF1-208ENST00000482904 PHF20L1A8MW92 1017 aa28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 RRP1P56182 461 aaKnown RBP28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 TTF1Q15361 905 aaPredicted RBP28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 LRRCC1Q9C099 1032 aa28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 ZFYVE28Q9HCC9 887 aa28.63■■■□□ 2.17
RHBDF1-208ENST00000482904 SLURP2P0DP57 97 aa28.62■■■□□ 2.17
RHBDF1-208ENST00000482904 PPP4CP60510 307 aa28.62■■■□□ 2.17
RHBDF1-208ENST00000482904 MAPKAPK5Q8IW41 473 aa28.62■■■□□ 2.17
RHBDF1-208ENST00000482904 MIGA1Q8NAN2 632 aa28.62■■■□□ 2.17
RHBDF1-208ENST00000482904 TGFBRAP1Q8WUH2 860 aa28.62■■■□□ 2.17
RHBDF1-208ENST00000482904 FAM196BA6NMK8 535 aa28.61■■■□□ 2.17
RHBDF1-208ENST00000482904 PKN2Q16513 984 aaKnown RBP28.61■■■□□ 2.17
RHBDF1-208ENST00000482904 KCNH4Q9UQ05 1017 aa28.61■■■□□ 2.17
RHBDF1-208ENST00000482904 FLT1P17948 1338 aa28.61■■■□□ 2.17
RHBDF1-208ENST00000482904 BTBD19C9JJ37 291 aa28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 CTNND1O60716 968 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 DYNLL1P63167 89 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 MAP3K10Q02779 954 aa28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 CERS3Q8IU89 383 aa28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 ERO1AQ96HE7 468 aa28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 DHX36Q9H2U1 1008 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-208ENST00000482904 GOLIM4O00461 696 aa28.59■■■□□ 2.17
RHBDF1-208ENST00000482904 TBC1D12O60347 775 aa28.59■■■□□ 2.17
RHBDF1-208ENST00000482904 TRIM34Q9BYJ4 488 aa28.59■■■□□ 2.17
RHBDF1-208ENST00000482904 ZCCHC17Q9NP64 241 aaKnown RBP28.59■■■□□ 2.17
RHBDF1-208ENST00000482904 ZHX2Q9Y6X8 837 aa28.59■■■□□ 2.17
RHBDF1-208ENST00000482904 MYO5AQ9Y4I1 1855 aaKnown RBP28.58■■■□□ 2.17
RHBDF1-208ENST00000482904 PTPRAP18433 802 aa28.58■■■□□ 2.17
RHBDF1-208ENST00000482904 TMED8Q6PL24 325 aaPredicted RBP28.58■■■□□ 2.17
RHBDF1-208ENST00000482904 SP3Q02447 781 aa28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 CD99L2Q8TCZ2 262 aa28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 PI4KBQ9UBF8 816 aa28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 HERC5Q9UII4 1024 aaKnown RBP28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 TRIM17Q9Y577 477 aa28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 DOCK1Q14185 1865 aa28.57■■■□□ 2.16
RHBDF1-208ENST00000482904 SMARCA5O60264 1052 aaPredicted RBP28.56■■■□□ 2.16
RHBDF1-208ENST00000482904 USP5P45974 858 aa28.56■■■□□ 2.16
RHBDF1-208ENST00000482904 CRACR2BQ8N4Y2 399 aaPredicted RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms