RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
SORT1-204ENST00000482236 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
SORT1-204ENST00000482236 FAM198AQ9UFP1 575 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
SORT1-204ENST00000482236 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
SORT1-204ENST00000482236 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 ZAP70P43403 619 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 PPATQ06203 517 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 CRHR2Q13324 411 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 PPIL2Q13356 520 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 KIF22Q14807 665 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 PKN2Q16513 984 aaKnown RBP13.68□□□□□ -0.22
SORT1-204ENST00000482236 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
SORT1-204ENST00000482236 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
SORT1-204ENST00000482236 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.224e-7■■□□□ 11.5
SORT1-204ENST00000482236 TRIM17Q9Y577 477 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 OTOFQ9HC10 1997 aa13.68□□□□□ -0.22
SORT1-204ENST00000482236 GPR75-ASB3A0A0A6YYF3 556 aa13.67□□□□□ -0.22
SORT1-204ENST00000482236 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
SORT1-204ENST00000482236 CYP7A1P22680 504 aa13.67□□□□□ -0.22
SORT1-204ENST00000482236 USP5P45974 858 aa13.67□□□□□ -0.22
SORT1-204ENST00000482236 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
SORT1-204ENST00000482236 BRI3BPQ8WY22 251 aa13.67□□□□□ -0.22
SORT1-204ENST00000482236 EAF2Q96CJ1 260 aaPredicted RBP13.67□□□□□ -0.22
SORT1-204ENST00000482236 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
SORT1-204ENST00000482236 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 IRF6O14896 467 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
SORT1-204ENST00000482236 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
SORT1-204ENST00000482236 GADL1Q6ZQY3 521 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
SORT1-204ENST00000482236 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
SORT1-204ENST00000482236 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
SORT1-204ENST00000482236 ZBTB22O15209 634 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
SORT1-204ENST00000482236 SP3Q02447 781 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 MAGEB6Q8N7X4 407 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 MIGA1Q8NAN2 632 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
SORT1-204ENST00000482236 DDX4Q9NQI0 724 aaKnown RBP13.65□□□□□ -0.22
SORT1-204ENST00000482236 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
SORT1-204ENST00000482236 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 MAST2Q6P0Q8 1798 aa13.65□□□□□ -0.22
SORT1-204ENST00000482236 DDTLA6NHG4 134 aaPredicted RBP13.64□□□□□ -0.23
SORT1-204ENST00000482236 SOX10P56693 466 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 NOM1Q5C9Z4 860 aaKnown RBP13.64□□□□□ -0.23
SORT1-204ENST00000482236 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
SORT1-204ENST00000482236 PARK7Q99497 189 aaKnown RBP13.64□□□□□ -0.23
SORT1-204ENST00000482236 EFCC1Q9HA90 598 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
SORT1-204ENST00000482236 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 ZHX2Q9Y6X8 837 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
SORT1-204ENST00000482236 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 FAM196BA6NMK8 535 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 GOLIM4O00461 696 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 RHBDL3P58872 404 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 NOL9Q5SY16 702 aaKnown RBP13.63□□□□□ -0.23
SORT1-204ENST00000482236 FBXO46Q6PJ61 603 aaPredicted RBP13.63□□□□□ -0.23
SORT1-204ENST00000482236 MS4A4AQ96JQ5 239 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 PTPN18Q99952 460 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 CFHR5Q9BXR6 569 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
SORT1-204ENST00000482236 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
SORT1-204ENST00000482236 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
SORT1-204ENST00000482236 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
SORT1-204ENST00000482236 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
SORT1-204ENST00000482236 PDHXO00330 501 aa13.62□□□□□ -0.23
SORT1-204ENST00000482236 CTNND1O60716 968 aaKnown RBP13.62□□□□□ -0.23
SORT1-204ENST00000482236 IGSF3O75054 1194 aa13.62□□□□□ -0.23
SORT1-204ENST00000482236 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
SORT1-204ENST00000482236 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
SORT1-204ENST00000482236 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
SORT1-204ENST00000482236 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.62□□□□□ -0.23
SORT1-204ENST00000482236 FLT1P17948 1338 aa13.62□□□□□ -0.23
SORT1-204ENST00000482236 MAGEB6P1A0A0J9YX57 407 aa13.61□□□□□ -0.23
SORT1-204ENST00000482236 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
SORT1-204ENST00000482236 SH3BP5LQ7L8J4 393 aa13.61□□□□□ -0.23
SORT1-204ENST00000482236 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
SORT1-204ENST00000482236 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
SORT1-204ENST00000482236 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
SORT1-204ENST00000482236 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms