RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TP53INP1Q96A56 240 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 RHOVQ96L33 236 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 CORO1BQ9BR76 489 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 CARD10Q9BWT7 1032 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 KCNQ5Q9NR82 932 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 KLHL42Q9P2K6 505 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
VPS41-212ENST00000482217 GSTP1P09211 210 aaKnown RBP5.61□□□□□ -1.51
VPS41-212ENST00000482217 LMNB1P20700 586 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 EIF4A3P38919 411 aaKnown RBP5.61□□□□□ -1.51
VPS41-212ENST00000482217 POU4F3Q15319 338 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 GORABQ5T7V8 394 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 SPTY2D1Q68D10 685 aaPredicted RBP5.61□□□□□ -1.51
VPS41-212ENST00000482217 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.61□□□□□ -1.51
VPS41-212ENST00000482217 TRIM42Q8IWZ5 723 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 CEP41Q9BYV8 373 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 CBX8Q9HC52 389 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 KRT82Q9NSB4 513 aa5.61□□□□□ -1.51
VPS41-212ENST00000482217 SBNO2Q9Y2G9 1366 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 MINDY4BA8MYZ0 360 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 PEX14O75381 377 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 TRIM37O94972 964 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 PF4P02776 101 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 TFE3P19532 575 aaPredicted RBP5.6□□□□□ -1.51
VPS41-212ENST00000482217 CAMK2GQ13555 558 aaPredicted RBP5.6□□□□□ -1.51
VPS41-212ENST00000482217 GNL2Q13823 731 aaKnown RBP5.6□□□□□ -1.51
VPS41-212ENST00000482217 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 KIAA0825Q8IV33 1275 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 TMTC2Q8N394 836 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 STK35Q8TDR2 534 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 SPON2Q9BUD6 331 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 MIR1-1HGQ9H1L0 117 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 ADAMTS1Q9UHI8 967 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 TLR6Q9Y2C9 796 aa5.6□□□□□ -1.51
VPS41-212ENST00000482217 LAS1LQ9Y4W2 734 aaKnown RBP5.6□□□□□ -1.51
VPS41-212ENST00000482217 SUPT16HQ9Y5B9 1047 aaKnown RBP5.6□□□□□ -1.51
VPS41-212ENST00000482217 ROBO2Q9HCK4 1378 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 LOC100289279A0A1B0GTE1 492 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 ADAM11O75078 769 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 GARTP22102 1010 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 MAOBP27338 520 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 NLRP12P59046 1061 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 DUOXA2Q1HG44 320 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 SNAP47Q5SQN1 464 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 RASIP1Q5U651 963 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 ACAD11Q709F0 780 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 APBB1IPQ7Z5R6 666 aaPredicted RBP5.59□□□□□ -1.51
VPS41-212ENST00000482217 SLC51AQ86UW1 340 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 GPATCH11Q8N954 259 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 SLC43A3Q8NBI5 491 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 ZNF296Q8WUU4 475 aaPredicted RBP5.59□□□□□ -1.51
VPS41-212ENST00000482217 MEGF10Q96KG7 1140 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 USP26Q9BXU7 913 aa5.59□□□□□ -1.51
VPS41-212ENST00000482217 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS41-212ENST00000482217 SYNGAP1Q96PV0 1343 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 F6X3S4 739 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 GREM1O60565 184 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 ITGB7P26010 798 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 GJA8P48165 433 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 MAP1SQ66K74 1059 aaPredicted RBP5.58□□□□□ -1.52
VPS41-212ENST00000482217 FBXL19Q6PCT2 694 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
VPS41-212ENST00000482217 GOLM1Q8NBJ4 401 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 GRIN3AQ8TCU5 1115 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 GATAD2BQ8WXI9 593 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 KCNB2Q92953 911 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 TINF2Q9BSI4 451 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 NT5C1AQ9BXI3 368 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 CAPN10Q9HC96 672 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 KCNK4Q9NYG8 393 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 INPP5FQ9Y2H2 1132 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 PCDHB5Q9Y5E4 795 aa5.58□□□□□ -1.52
VPS41-212ENST00000482217 MEGF11A6BM72 1044 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 DDX3YO15523 660 aaKnown RBP5.57□□□□□ -1.52
VPS41-212ENST00000482217 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
VPS41-212ENST00000482217 GLB1P16278 677 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 FAM160A1Q05DH4 1040 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 PAK2Q13177 524 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 PDE3AQ14432 1141 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 KIF4BQ2VIQ3 1234 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 PRSS36Q5K4E3 855 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 EXOSC6Q5RKV6 272 aaKnown RBP5.57□□□□□ -1.52
VPS41-212ENST00000482217 ANKRD34AQ69YU3 496 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 PRR23CQ6ZRP0 262 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 FAM196AQ6ZSG2 479 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 FAM9BQ8IZU0 186 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 RASGRP4Q8TDF6 673 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 GAL3ST3Q96A11 431 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 GPRASP2Q96D09 838 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 RNF208Q9H0X6 261 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 CCDC86Q9H6F5 360 aaKnown RBP5.57□□□□□ -1.52
VPS41-212ENST00000482217 TERF2IPQ9NYB0 399 aa5.57□□□□□ -1.52
VPS41-212ENST00000482217 FAM221AA4D161 298 aa5.56□□□□□ -1.52
VPS41-212ENST00000482217 ALX3O95076 343 aa5.56□□□□□ -1.52
VPS41-212ENST00000482217 WISP1O95388 367 aa5.56□□□□□ -1.52
VPS41-212ENST00000482217 ECEL1O95672 775 aa5.56□□□□□ -1.52
VPS41-212ENST00000482217 CTSBP07858 339 aa5.56□□□□□ -1.52
VPS41-212ENST00000482217 SEPT6Q14141 434 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms