RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 MAP4K4O95819 1239 aaPredicted RBP18.75■□□□□ 0.59
CDK9-203ENST00000480353 CETPP11597 493 aa18.75■□□□□ 0.59
CDK9-203ENST00000480353 INPP5BP32019 993 aa18.75■□□□□ 0.59
CDK9-203ENST00000480353 SNAPC2Q13487 334 aa18.75■□□□□ 0.59
CDK9-203ENST00000480353 TESPA1A2RU30 521 aaPredicted RBP18.74■□□□□ 0.59
CDK9-203ENST00000480353 PLCG2P16885 1265 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 PPATQ06203 517 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 PPIL2Q13356 520 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 TAF1CQ15572 869 aaPredicted RBP18.74■□□□□ 0.59
CDK9-203ENST00000480353 ZFPM1Q8IX07 1006 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 CLASRPQ8N2M8 674 aaKnown RBP18.74■□□□□ 0.59
CDK9-203ENST00000480353 EAF2Q96CJ1 260 aaPredicted RBP18.74■□□□□ 0.59
CDK9-203ENST00000480353 ZFYVE28Q9HCC9 887 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
CDK9-203ENST00000480353 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
CDK9-203ENST00000480353 ZAP70P43403 619 aa18.73■□□□□ 0.59
CDK9-203ENST00000480353 CRHR2Q13324 411 aa18.73■□□□□ 0.59
CDK9-203ENST00000480353 ERO1AQ96HE7 468 aa18.73■□□□□ 0.59
CDK9-203ENST00000480353 ZNF512BQ96KM6 892 aaPredicted RBP18.73■□□□□ 0.59
CDK9-203ENST00000480353 R3HDMLQ9H3Y0 253 aa18.73■□□□□ 0.59
CDK9-203ENST00000480353 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
CDK9-203ENST00000480353 MYO5AQ9Y4I1 1855 aaKnown RBP18.72■□□□□ 0.59
CDK9-203ENST00000480353 IRF6O14896 467 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 IFIT2P09913 472 aaKnown RBP18.72■□□□□ 0.59
CDK9-203ENST00000480353 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 BRI3BPQ8WY22 251 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 KIF1BPQ96EK5 621 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 MS4A4AQ96JQ5 239 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 PTPN18Q99952 460 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
CDK9-203ENST00000480353 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK9-203ENST00000480353 TLR7Q9NYK1 1049 aaKnown RBP18.72■□□□□ 0.59
CDK9-203ENST00000480353 IGSF3O75054 1194 aa18.71■□□□□ 0.59
CDK9-203ENST00000480353 IDH1O75874 414 aaKnown RBP18.71■□□□□ 0.59
CDK9-203ENST00000480353 CYP2E1P05181 493 aaPredicted RBP18.71■□□□□ 0.59
CDK9-203ENST00000480353 ARHGEF6Q15052 776 aa18.71■□□□□ 0.59
CDK9-203ENST00000480353 TRIM34Q9BYJ4 488 aa18.71■□□□□ 0.59
CDK9-203ENST00000480353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDK9-203ENST00000480353 DDX4Q9NQI0 724 aaKnown RBP18.71■□□□□ 0.59
CDK9-203ENST00000480353 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
CDK9-203ENST00000480353 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
CDK9-203ENST00000480353 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
CDK9-203ENST00000480353 RHBDL3P58872 404 aa18.7■□□□□ 0.58
CDK9-203ENST00000480353 SP3Q02447 781 aa18.7■□□□□ 0.58
CDK9-203ENST00000480353 NOL9Q5SY16 702 aaKnown RBP18.7■□□□□ 0.58
CDK9-203ENST00000480353 TRIM17Q9Y577 477 aa18.7■□□□□ 0.58
CDK9-203ENST00000480353 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
CDK9-203ENST00000480353 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
CDK9-203ENST00000480353 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
CDK9-203ENST00000480353 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
CDK9-203ENST00000480353 SCYL3Q8IZE3 742 aa18.69■□□□□ 0.58
CDK9-203ENST00000480353 SH3RF3Q8TEJ3 882 aaPredicted RBP18.69■□□□□ 0.58
CDK9-203ENST00000480353 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
CDK9-203ENST00000480353 OSBPL5Q9H0X9 879 aaPredicted RBP18.69■□□□□ 0.58
CDK9-203ENST00000480353 DOCK1Q14185 1865 aa18.69■□□□□ 0.58
CDK9-203ENST00000480353 SLC34A2O95436 690 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 CYP7A1P22680 504 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 KIF22Q14807 665 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 SH3BP5LQ7L8J4 393 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 FAM43AQ8N2R8 423 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 CD99L2Q8TCZ2 262 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
CDK9-203ENST00000480353 PIH1D3Q9NQM4 214 aaKnown RBP18.68■□□□□ 0.58
CDK9-203ENST00000480353 HPS5Q9UPZ3 1129 aa18.68■□□□□ 0.58
CDK9-203ENST00000480353 BTBD19C9JJ37 291 aa18.67■□□□□ 0.58
CDK9-203ENST00000480353 CTNND1O60716 968 aaKnown RBP18.67■□□□□ 0.58
CDK9-203ENST00000480353 TTF1Q15361 905 aaPredicted RBP18.67■□□□□ 0.58
CDK9-203ENST00000480353 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
CDK9-203ENST00000480353 CERS3Q8IU89 383 aa18.67■□□□□ 0.58
CDK9-203ENST00000480353 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
CDK9-203ENST00000480353 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
CDK9-203ENST00000480353 ZHX2Q9Y6X8 837 aa18.67■□□□□ 0.58
CDK9-203ENST00000480353 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
CDK9-203ENST00000480353 MAGEB6Q8N7X4 407 aa18.66■□□□□ 0.58
CDK9-203ENST00000480353 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
CDK9-203ENST00000480353 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
CDK9-203ENST00000480353 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
CDK9-203ENST00000480353 ATRNL1Q5VV63 1379 aa18.66■□□□□ 0.58
CDK9-203ENST00000480353 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 PHF20L1A8MW92 1017 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 CXCL11O14625 94 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 TBC1D12O60347 775 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 HLA-DOAP06340 250 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 USP5P45974 858 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 MLLT1Q03111 559 aaPredicted RBP18.65■□□□□ 0.58
CDK9-203ENST00000480353 GADL1Q6ZQY3 521 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 DNAJC2Q99543 621 aaKnown RBP18.65■□□□□ 0.58
CDK9-203ENST00000480353 PI4KBQ9UBF8 816 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 KCNH4Q9UQ05 1017 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 FOCADQ5VW36 1801 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
CDK9-203ENST00000480353 COL2A1P02458 1487 aaPredicted RBP18.65■□□□□ 0.58
CDK9-203ENST00000480353 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
CDK9-203ENST00000480353 PDHXO00330 501 aa18.64■□□□□ 0.57
CDK9-203ENST00000480353 TLR2O60603 784 aa18.64■□□□□ 0.57
CDK9-203ENST00000480353 PTPRAP18433 802 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms