RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PAK6Q9NQU5 681 aaPredicted RBP20.13■□□□□ 0.81
DDX56-210ENST00000479440 ZHX2Q9Y6X8 837 aa20.13■□□□□ 0.81
DDX56-210ENST00000479440 AK9Q5TCS8 1911 aa20.12■□□□□ 0.81
DDX56-210ENST00000479440 PTPRAP18433 802 aa20.12■□□□□ 0.81
DDX56-210ENST00000479440 COA7Q96BR5 231 aa20.12■□□□□ 0.81
DDX56-210ENST00000479440 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
DDX56-210ENST00000479440 RANBP2P49792 3224 aaKnown RBP20.11■□□□□ 0.81
DDX56-210ENST00000479440 SALL1Q9NSC2 1324 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 EYA2O00167 538 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 SOX1O00570 391 aaPredicted RBP20.11■□□□□ 0.81
DDX56-210ENST00000479440 NECAB2Q7Z6G3 386 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 LRCH3Q96II8 777 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 PNMA3Q9UL41 463 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 AFG3L2Q9Y4W6 797 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 LRRFIP2Q9Y608 721 aaKnown RBP20.11■□□□□ 0.81
DDX56-210ENST00000479440 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
DDX56-210ENST00000479440 RFX7Q2KHR2 1363 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 PHF20L1A8MW92 1017 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 ENTPD3O75355 529 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 ZSCAN29Q8IWY8 852 aaPredicted RBP20.1■□□□□ 0.81
DDX56-210ENST00000479440 IDI2Q9BXS1 227 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 CRISPLD2Q9H0B8 497 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 STAP2Q9UGK3 403 aa20.1■□□□□ 0.81
DDX56-210ENST00000479440 PTPRCP08575 1304 aa20.09■□□□□ 0.81
DDX56-210ENST00000479440 SEMA3EO15041 775 aa20.09■□□□□ 0.81
DDX56-210ENST00000479440 RGS3P49796 1198 aa20.09■□□□□ 0.81
DDX56-210ENST00000479440 ZGPATQ8N5A5 531 aaKnown RBP20.09■□□□□ 0.81
DDX56-210ENST00000479440 ANKLE1Q8NAG6 615 aa20.09■□□□□ 0.81
DDX56-210ENST00000479440 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.09■□□□□ 0.81
DDX56-210ENST00000479440 AGTPBP1Q9UPW5 1226 aa20.09■□□□□ 0.81
DDX56-210ENST00000479440 MNX1P50219 401 aaPredicted RBP20.08■□□□□ 0.81
DDX56-210ENST00000479440 FAM110CQ1W6H9 321 aa20.08■□□□□ 0.81
DDX56-210ENST00000479440 GPR153Q6NV75 609 aa20.08■□□□□ 0.81
DDX56-210ENST00000479440 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.81
DDX56-210ENST00000479440 PAWRQ96IZ0 340 aaKnown RBP20.08■□□□□ 0.81
DDX56-210ENST00000479440 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
DDX56-210ENST00000479440 TRIM75PA6NK02 468 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 CTNND1O60716 968 aaKnown RBP20.07■□□□□ 0.8
DDX56-210ENST00000479440 BMP8BP34820 402 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 C7orf61Q8IZ16 206 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 ANKRD13CQ8N6S4 541 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 PTPRFP10586 1907 aa20.07■□□□□ 0.8
DDX56-210ENST00000479440 GAKO14976 1311 aa20.06■□□□□ 0.8
DDX56-210ENST00000479440 HMGCRP04035 888 aa20.06■□□□□ 0.8
DDX56-210ENST00000479440 RFX5P48382 616 aaPredicted RBP20.06■□□□□ 0.8
DDX56-210ENST00000479440 DZIP1Q86YF9 867 aaKnown RBP20.06■□□□□ 0.8
DDX56-210ENST00000479440 SLF2Q8IX21 1173 aa20.06■□□□□ 0.8
DDX56-210ENST00000479440 GDF15Q99988 308 aa20.06■□□□□ 0.8
DDX56-210ENST00000479440 FBXO3Q9UK99 471 aa20.06■□□□□ 0.8
DDX56-210ENST00000479440 MAP3K10Q02779 954 aa20.05■□□□□ 0.8
DDX56-210ENST00000479440 PROCA1Q8NCQ7 364 aaPredicted RBP20.05■□□□□ 0.8
DDX56-210ENST00000479440 DIS3LQ8TF46 1054 aaKnown RBP20.05■□□□□ 0.8
DDX56-210ENST00000479440 ALPK3Q96L96 1907 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 CIAO1O76071 339 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 MRPL50Q8N5N7 158 aaKnown RBP20.04■□□□□ 0.8
DDX56-210ENST00000479440 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
DDX56-210ENST00000479440 LOC285556D6RIA3 1793 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 ZBTB22O15209 634 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 GCLCP48506 637 aaPredicted RBP20.03■□□□□ 0.8
DDX56-210ENST00000479440 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDX56-210ENST00000479440 PICALMQ13492 652 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 TBC1D2Q9BYX2 928 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 NBPF3Q9H094 633 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 CEP126Q9P2H0 1117 aa20.03■□□□□ 0.8
DDX56-210ENST00000479440 ZMYND8Q9ULU4 1186 aaPredicted RBP20.03■□□□□ 0.8
DDX56-210ENST00000479440 DDTLA6NHG4 134 aaPredicted RBP20.02■□□□□ 0.8
DDX56-210ENST00000479440 BTDP43251 543 aa20.02■□□□□ 0.8
DDX56-210ENST00000479440 PHKA1P46020 1223 aa20.02■□□□□ 0.8
DDX56-210ENST00000479440 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
DDX56-210ENST00000479440 DEFB123Q8N688 67 aa20.02■□□□□ 0.8
DDX56-210ENST00000479440 SIL1Q9H173 461 aa20.02■□□□□ 0.8
DDX56-210ENST00000479440 HMX1Q9NP08 348 aaPredicted RBP20.02■□□□□ 0.8
DDX56-210ENST00000479440 RPTORQ8N122 1335 aa20.02■□□□□ 0.79
DDX56-210ENST00000479440 LRIT3Q3SXY7 679 aa20.01■□□□□ 0.79
DDX56-210ENST00000479440 OSBPL5Q9H0X9 879 aaPredicted RBP20.01■□□□□ 0.79
DDX56-210ENST00000479440 C11orf49Q9H6J7 331 aa20.01■□□□□ 0.79
DDX56-210ENST00000479440 MYH2Q9UKX2 1941 aa20.01■□□□□ 0.79
DDX56-210ENST00000479440 DDX60LQ5H9U9 1706 aaKnown RBP20.01■□□□□ 0.79
DDX56-210ENST00000479440 MROH7-TTC4A0A0A0MT08 1334 aa20.01■□□□□ 0.79
DDX56-210ENST00000479440 PDS5AQ29RF7 1337 aaKnown RBP20.01■□□□□ 0.79
DDX56-210ENST00000479440 TDHQ8IZJ6 230 aa20■□□□□ 0.79
DDX56-210ENST00000479440 FAM163AQ96GL9 167 aaPredicted RBP20■□□□□ 0.79
DDX56-210ENST00000479440 DDX4Q9NQI0 724 aaKnown RBP20■□□□□ 0.79
DDX56-210ENST00000479440 FRMD4AQ9P2Q2 1039 aaPredicted RBP20■□□□□ 0.79
DDX56-210ENST00000479440 ABCF2Q9UG63 623 aa20■□□□□ 0.79
DDX56-210ENST00000479440 STXBP5LQ9Y2K9 1186 aa20■□□□□ 0.79
DDX56-210ENST00000479440 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
DDX56-210ENST00000479440 TBC1D12O60347 775 aa19.99■□□□□ 0.79
DDX56-210ENST00000479440 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
DDX56-210ENST00000479440 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
DDX56-210ENST00000479440 CCDC102BQ68D86 513 aa19.99■□□□□ 0.79
DDX56-210ENST00000479440 CCDC84Q86UT8 332 aaPredicted RBP19.99■□□□□ 0.79
DDX56-210ENST00000479440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDX56-210ENST00000479440 LAMA3Q16787 3333 aa19.99■□□□□ 0.79
DDX56-210ENST00000479440 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms