RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C11orf95C9JLR9 678 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 KRT4P19013 534 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 WDR44Q5JSH3 913 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TBC1D19Q8N5T2 526 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 SPDL1Q96EA4 605 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 GINS4Q9BRT9 223 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 PIGUQ9H490 435 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 WRNQ14191 1432 aaPredicted RBP eCLIP6.02□□□□□ -1.45
USF3-202ENST00000478658 EXOC5O00471 708 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 RPL19P84098 196 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 CCDC93Q567U6 631 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TMTC2Q8N394 836 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 RNF10Q8N5U6 811 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 CDCA7LQ96GN5 454 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 CCDC90BQ9GZT6 254 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 SH2B1Q9NRF2 756 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 LMCD1Q9NZU5 365 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 MBD2Q9UBB5 411 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 EBAG9O00559 213 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TRIM37O94972 964 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 POLR3DP05423 398 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 KRT5P13647 590 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 ARHGDIAP52565 204 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 IGBP1P78318 339 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 DPYDQ12882 1025 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 BFSP1Q12934 665 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 ESRP1Q6NXG1 681 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 SMARCAL1Q9NZC9 954 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 SCINQ9Y6U3 715 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 ZNF233A6NK53 670 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TRAF5O00463 557 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 SLC8A1P32418 973 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 POLR3CQ9BUI4 534 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 MRGBPQ9NV56 204 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 TCF3P15923 654 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 TATP17735 454 aaPredicted RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 ZSCAN23Q3MJ62 389 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 HSPH1Q92598 858 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 PDCD10Q9BUL8 212 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 NOD1Q9Y239 953 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ATP6V0A2Q9Y487 856 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 AK9Q5TCS8 1911 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 MYO10Q9HD67 2058 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 TRIM75PA6NK02 468 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 M0R3G1 203 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 TRAK2O60296 914 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 GCNAQ96QF7 691 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 FYCO1Q9BQS8 1478 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 LRRIQ3A6PVS8 624 aaPredicted RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 PRPF4BQ13523 1007 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 CKAP2LQ8IYA6 745 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 EPAS1Q99814 870 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 XAB2Q9HCS7 855 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 AGTPBP1Q9UPW5 1226 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 TK2O00142 265 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 HMOX1P09601 288 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ZFXP17010 805 aaPredicted RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 PTK2BQ14289 1009 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 USH1GQ495M9 461 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 MMS22LQ6ZRQ5 1243 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ARL8AQ96BM9 186 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ERN1O75460 977 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 ST5P78524 1137 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 DYNC1I2Q13409 638 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 PRPSAP1Q14558 356 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 KSR2Q6VAB6 950 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 MPNDQ8N594 471 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 NLRP7Q8WX94 980 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ARHGEF1Q92888 912 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 AIDAQ96BJ3 306 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 SAMM50Q9Y512 469 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 GARSP41250 739 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 MAP3K12Q12852 859 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 C1orf228Q6PIY5 440 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 CATSPER3Q86XQ3 398 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 EXOC8Q8IYI6 725 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 SLC17A8Q8NDX2 589 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 LRP2BPQ9P2M1 347 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 DHX57Q6P158 1386 aaKnown RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 CCDC151A5D8V7 595 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 PDE6BP35913 854 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ODR4Q5SWX8 454 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 RCSD1Q6JBY9 416 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 GTF3C6Q969F1 213 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ARFGAP3Q9NP61 516 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 ABI2Q9NYB9 513 aaPredicted RBP6.01□□□□□ -1.45
USF3-202ENST00000478658 ANAPC5Q9UJX4 755 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 FRMD4BQ9Y2L6 1034 aa6.01□□□□□ -1.45
USF3-202ENST00000478658 A0A1B0GUL7 405 aa6□□□□□ -1.45
USF3-202ENST00000478658 H0YCG3 227 aa6□□□□□ -1.45
USF3-202ENST00000478658 THAP12O43422 761 aa6□□□□□ -1.45
USF3-202ENST00000478658 MYL1P05976 194 aa6□□□□□ -1.45
USF3-202ENST00000478658 IFIT1P09914 478 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 PCK1P35558 622 aa6□□□□□ -1.45
USF3-202ENST00000478658 SERPINB10P48595 397 aa6□□□□□ -1.45
USF3-202ENST00000478658 SFSWAPQ12872 951 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 ZMYND11Q15326 602 aa6□□□□□ -1.45
USF3-202ENST00000478658 POTEEQ6S8J3 1075 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms