RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 AKAP2Q9Y2D5 859 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
LRCH3-215ENST00000476664 CDC42BPAQ5VT25 1732 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 CFAP65Q6ZU64 1925 aaKnown RBP8.82□□□□□ -1
LRCH3-215ENST00000476664 TET3O43151 1660 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 MROH1Q8NDA8 1641 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 IMPDH2P12268 514 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 CRKP46108 304 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 NFKB2Q00653 900 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 SSRP1Q08945 709 aaKnown RBP8.81□□□□□ -1
LRCH3-215ENST00000476664 VPS72Q15906 364 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 CTC1Q2NKJ3 1217 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 DIEXFQ68CQ4 756 aaKnown RBP8.81□□□□□ -1
LRCH3-215ENST00000476664 WWC2Q6AWC2 1192 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 DTHD1Q6ZMT9 781 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 THNSL2Q86YJ6 484 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 NIM1KQ8IY84 436 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 NLRP3Q96P20 1036 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
LRCH3-215ENST00000476664 LRRC3Q9BY71 257 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 CHRDQ9H2X0 955 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
LRCH3-215ENST00000476664 ADH1AP07327 375 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 MYCLP1P12525 358 aaPredicted RBP8.8□□□□□ -1
LRCH3-215ENST00000476664 ZNF165P49910 485 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 TRIM32Q13049 653 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 NR5A1Q13285 461 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 SEPT6Q14141 434 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 TRIP4Q15650 581 aaPredicted RBP8.8□□□□□ -1
LRCH3-215ENST00000476664 TMEM67Q5HYA8 995 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 PPP4R4Q6NUP7 873 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 TMEM214Q6NUQ4 689 aaKnown RBP8.8□□□□□ -1
LRCH3-215ENST00000476664 C11orf96Q7Z7L8 435 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 MPNDQ8N594 471 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 RHBDD1Q8TEB9 315 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 SUSD3Q96L08 255 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 MPHOSPH6Q99547 160 aaKnown RBP8.8□□□□□ -1
LRCH3-215ENST00000476664 MTRQ99707 1265 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 CHD2O14647 1828 aaKnown RBP8.8□□□□□ -1
LRCH3-215ENST00000476664 ASXL1Q8IXJ9 1541 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 CLIP1P30622 1438 aa8.8□□□□□ -1
LRCH3-215ENST00000476664 GLI3P10071 1580 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 RALGAPBQ86X10 1494 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 MAFGO15525 162 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 S1PR4O95977 384 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 LDHAP00338 332 aaKnown RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 EDN3P14138 238 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 ATF3P18847 181 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 POU3F3P20264 500 aaPredicted RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 MCM4P33991 863 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 TXLNAP40222 546 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 CASP7P55210 303 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 SETQ01105 290 aaPredicted RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 ZRSR2Q15696 482 aaKnown RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 CWF19L2Q2TBE0 894 aaKnown RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 COL13A1Q5TAT6 717 aaPredicted RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 IL17RAQ96F46 866 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 SCYL1Q96KG9 808 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 GNL3LQ9NVN8 582 aaKnown RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 ABI2Q9NYB9 513 aaPredicted RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 KCNMB2Q9Y691 235 aa8.79□□□□□ -1
LRCH3-215ENST00000476664 GPATCH8Q9UKJ3 1502 aaKnown RBP8.79□□□□□ -1
LRCH3-215ENST00000476664 ERVK-7P63135 1459 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 DIAPH1O60610 1272 aaKnown RBP8.78□□□□□ -1
LRCH3-215ENST00000476664 FBXO24O75426 580 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 WDHD1O75717 1129 aaPredicted RBP8.78□□□□□ -1
LRCH3-215ENST00000476664 RGS20O76081 388 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 DDAH1O94760 285 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 GJB6O95452 261 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 ADH1CP00326 375 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 EPB42P16452 691 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 CES1P23141 567 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 INPP5BP32019 993 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 VEGFBP49765 207 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 RPS26P62854 115 aaKnown RBP8.78□□□□□ -1
LRCH3-215ENST00000476664 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
LRCH3-215ENST00000476664 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
LRCH3-215ENST00000476664 IL21Q9HBE4 155 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 ARNT2Q9HBZ2 717 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 ZMYM5Q9UJ78 669 aa8.78□□□□□ -1
LRCH3-215ENST00000476664 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 A0A1W2PP55 124 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 RASGRP1O95267 797 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 LMNB1P20700 586 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 DHX8Q14562 1220 aaKnown RBP8.77□□□□□ -1.01
LRCH3-215ENST00000476664 ZC3H12BQ5HYM0 836 aaKnown RBP8.77□□□□□ -1.01
LRCH3-215ENST00000476664 PERM1Q5SV97 790 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 AXDND1Q5T1B0 1012 aaPredicted RBP8.77□□□□□ -1.01
LRCH3-215ENST00000476664 TPTE2Q6XPS3 522 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 AGMOQ6ZNB7 445 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 SPATC1Q76KD6 591 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms