RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-209	ENST00000476241	TTC6	Q86TZ1	520 aa		18.21	■□□□□ 0.51
HNRNPU-209	ENST00000476241	BBX	Q8WY36	941 aa	Predicted RBP	18.21	■□□□□ 0.51
HNRNPU-209	ENST00000476241	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.21	■□□□□ 0.51
HNRNPU-209	ENST00000476241	MET	P08581	1390 aa		18.21	■□□□□ 0.51
HNRNPU-209	ENST00000476241	PHACTR2	O75167	634 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	EIF6	P56537	245 aa	Known RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	KRT79	Q5XKE5	535 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	IL17RE	Q8NFR9	667 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TPCN1	Q9ULQ1	816 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NFE2L3	Q9Y4A8	694 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SH3TC1	Q8TE82	1336 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	IBSP	P21815	317 aa	Predicted RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	LARGE2	Q8N3Y3	721 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	EAF2	Q96CJ1	260 aa	Predicted RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF274	Q96GC6	653 aa	Predicted RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	XAGE2	Q96GT9	111 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PLVAP	Q9BX97	442 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MYOM2	P54296	1465 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	VWA3A	A6NCI4	1184 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	GNA11	P29992	359 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	UNC5CL	Q8IV45	518 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ARFGAP2	Q8N6H7	521 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MRFAP1L1	Q96HT8	127 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	KIAA1468	Q9P260	1216 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PRDM15	P57071	1507 aa	Predicted RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SLC4A8	Q2Y0W8	1093 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	KRT40	Q6A162	431 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	DHX37	Q8IY37	1157 aa	Known RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	LMBR1	Q8WVP7	490 aa		18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NAPG	Q99747	312 aa	Predicted RBP	18.2	■□□□□ 0.5
HNRNPU-209	ENST00000476241	POLR2D	O15514	142 aa	Known RBP	18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NEK11	Q8NG66	645 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CAPZA3	Q96KX2	299 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF853	P0CG23	659 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ATRIP	Q8WXE1	791 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241		E7EWF7	191 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NR1I2	O75469	434 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PPP2R5B	Q15173	497 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MYSM1	Q5VVJ2	828 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SYCP3	Q8IZU3	236 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CCDC155	Q8N6L0	562 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZFP91	Q96JP5	570 aa	Predicted RBP	18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	BEND3	Q5T5X7	828 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	BRINP3	Q76B58	766 aa		18.19	■□□□□ 0.5
HNRNPU-209	ENST00000476241	FAM89A	Q96GI7	184 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	XPO4	Q9C0E2	1151 aa	Known RBP	18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SLC52A2	Q9HAB3	445 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241		A0A0D9SFI3	127 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MACROD2	A1Z1Q3	448 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PRPH	P41219	470 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TRAF1	Q13077	416 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TBC1D5	Q92609	795 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	LSG1	Q9H089	658 aa	Known RBP	18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF408	Q9H9D4	720 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	A1BG	P04217	495 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	HOOK3	Q86VS8	718 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ANKRD2	Q9GZV1	360 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CCT6A	P40227	531 aa	Known RBP	18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TMTC1	Q8IUR5	882 aa		18.18	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PLCD1	P51178	756 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF174	Q15697	407 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CHAMP1	Q96JM3	812 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZKSCAN3	Q9BRR0	538 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TSGA10	Q9BZW7	698 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PFKFB2	O60825	505 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	GIGYF1	O75420	1035 aa	Predicted RBP	18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TBC1D8B	Q0IIM8	1120 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CYP26C1	Q6V0L0	522 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SIRT2	Q8IXJ6	389 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	USP28	Q96RU2	1077 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MCM9	Q9NXL9	1143 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	AFF2	P51816	1311 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NEURL1B	A8MQ27	555 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	RASEF	Q8IZ41	740 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CLASP1	Q7Z460	1538 aa		18.17	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MAP4K1	Q92918	833 aa		18.16	■□□□□ 0.5
HNRNPU-209	ENST00000476241	VPS16	Q9H269	839 aa		18.16	■□□□□ 0.5
HNRNPU-209	ENST00000476241	RRP36	Q96EU6	259 aa	Known RBP	18.16	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NDUFB9	Q9Y6M9	179 aa		18.16	■□□□□ 0.5
HNRNPU-209	ENST00000476241	FAM76A	Q8TAV0	307 aa		18.16	■□□□□ 0.5
HNRNPU-209	ENST00000476241	LRMP	Q12912	555 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	POSTN	Q15063	836 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	PUM3	Q15397	648 aa	Known RBP	18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	DPY19L2	Q6NUT2	758 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	NLGN1	Q8N2Q7	840 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CCDC24	Q8N4L8	307 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	TSC1	Q92574	1164 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	EDC3	Q96F86	508 aa	Known RBP	18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	CARD10	Q9BWT7	1032 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	SYNRG	Q9UMZ2	1314 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ERVV-2	B6SEH9	535 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ITGA6	P23229	1130 aa		18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF496	Q96IT1	587 aa	Predicted RBP	18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	ZNF594	Q96JF6	807 aa	Predicted RBP	18.15	■□□□□ 0.5
HNRNPU-209	ENST00000476241	MYO5C	Q9NQX4	1742 aa		18.14	■□□□□ 0.5
HNRNPU-209	ENST00000476241	KDR	P35968	1356 aa		18.14	■□□□□ 0.5
HNRNPU-209	ENST00000476241	RBM6	P78332	1123 aa	Known RBP	18.14	■□□□□ 0.49
HNRNPU-209	ENST00000476241	RASAL2	Q9UJF2	1139 aa		18.14	■□□□□ 0.49
HNRNPU-209	ENST00000476241	PLA2R1	Q13018	1463 aa		18.14	■□□□□ 0.49
HNRNPU-209	ENST00000476241	TNNC1	P63316	161 aa		18.14	■□□□□ 0.49

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