RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SNCAIPQ9Y6H5 919 aa15.06■□□□□ 0
SSR1-205ENST00000475213 MROH7-TTC4A0A0A0MT08 1334 aa15.06■□□□□ 0
SSR1-205ENST00000475213 SPDYE5A6NIY4 337 aa15.05■□□□□ -0
SSR1-205ENST00000475213 RGS3P49796 1198 aa15.05■□□□□ -0
SSR1-205ENST00000475213 CCDC158Q5M9N0 1113 aa15.05■□□□□ -0
SSR1-205ENST00000475213 TTC39AQ5SRH9 613 aa15.05■□□□□ -0
SSR1-205ENST00000475213 OTUD7BQ6GQQ9 843 aa15.05■□□□□ -0
SSR1-205ENST00000475213 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
SSR1-205ENST00000475213 OTUD5Q96G74 571 aa15.05■□□□□ -0
SSR1-205ENST00000475213 RFX7Q2KHR2 1363 aa15.05■□□□□ -0
SSR1-205ENST00000475213 GPR75-ASB3A0A0A6YYF3 556 aa15.04■□□□□ -0
SSR1-205ENST00000475213 FKTNO75072 461 aa15.04■□□□□ -0
SSR1-205ENST00000475213 ENTPD3O75355 529 aa15.04■□□□□ -0
SSR1-205ENST00000475213 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
SSR1-205ENST00000475213 INPP5BP32019 993 aa15.04■□□□□ -0
SSR1-205ENST00000475213 GTF2A2P52657 109 aa15.04■□□□□ -0
SSR1-205ENST00000475213 ERO1BQ86YB8 467 aa15.04■□□□□ -0
SSR1-205ENST00000475213 BRI3BPQ8WY22 251 aa15.04■□□□□ -0
SSR1-205ENST00000475213 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
SSR1-205ENST00000475213 SNRKQ9NRH2 765 aa15.04■□□□□ -0
SSR1-205ENST00000475213 RAI14Q9P0K7 980 aa15.04■□□□□ -0
SSR1-205ENST00000475213 ZNF112Q9UJU3 913 aa15.04■□□□□ -0
SSR1-205ENST00000475213 DBNLQ9UJU6 430 aaKnown RBP15.04■□□□□ -0
SSR1-205ENST00000475213 COG6Q9Y2V7 657 aa15.04■□□□□ -0
SSR1-205ENST00000475213 CCL15-CCL14A0A0B4J2E2 113 aa15.03■□□□□ -0
SSR1-205ENST00000475213 LDHCP07864 332 aa15.03■□□□□ -0
SSR1-205ENST00000475213 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SSR1-205ENST00000475213 RHBDL3P58872 404 aa15.03■□□□□ -0
SSR1-205ENST00000475213 GSTO1P78417 241 aa15.03■□□□□ -0
SSR1-205ENST00000475213 CRHR2Q13324 411 aa15.03■□□□□ -0
SSR1-205ENST00000475213 CCL15Q16663 113 aa15.03■□□□□ -0
SSR1-205ENST00000475213 EAF2Q96CJ1 260 aaPredicted RBP15.03■□□□□ -0
SSR1-205ENST00000475213 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
SSR1-205ENST00000475213 TLR7Q9NYK1 1049 aaKnown RBP15.03■□□□□ -0
SSR1-205ENST00000475213 LRP2BPQ9P2M1 347 aa15.03■□□□□ -0
SSR1-205ENST00000475213 DDX19BQ9UMR2 479 aa15.03■□□□□ -0
SSR1-205ENST00000475213 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
SSR1-205ENST00000475213 MAST2Q6P0Q8 1798 aa15.03■□□□□ -0
SSR1-205ENST00000475213 ATRNL1Q5VV63 1379 aa15.02■□□□□ -0
SSR1-205ENST00000475213 IRF6O14896 467 aa15.02■□□□□ -0
SSR1-205ENST00000475213 PICALMQ13492 652 aa15.02■□□□□ -0
SSR1-205ENST00000475213 SH3BP5LQ7L8J4 393 aa15.02■□□□□ -0
SSR1-205ENST00000475213 ZNF512BQ96KM6 892 aaPredicted RBP15.02■□□□□ -0
SSR1-205ENST00000475213 ZBTB40Q9NUA8 1239 aa15.02■□□□□ -0
SSR1-205ENST00000475213 DDTLA6NHG4 134 aaPredicted RBP15.01□□□□□ -0.01
SSR1-205ENST00000475213 CYP2E1P05181 493 aaPredicted RBP15.01□□□□□ -0.01
SSR1-205ENST00000475213 PPATQ06203 517 aa15.01□□□□□ -0.01
SSR1-205ENST00000475213 PPIL2Q13356 520 aa15.01□□□□□ -0.01
SSR1-205ENST00000475213 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
SSR1-205ENST00000475213 ERC1Q8IUD2 1116 aa15.01□□□□□ -0.01
SSR1-205ENST00000475213 ZSCAN29Q8IWY8 852 aaPredicted RBP15.01□□□□□ -0.01
SSR1-205ENST00000475213 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
SSR1-205ENST00000475213 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
SSR1-205ENST00000475213 MAP4K4O95819 1239 aaPredicted RBP15□□□□□ -0.01
SSR1-205ENST00000475213 CETPP11597 493 aa15□□□□□ -0.01
SSR1-205ENST00000475213 ZAP70P43403 619 aa15□□□□□ -0.01
SSR1-205ENST00000475213 MAP3K10Q02779 954 aa15□□□□□ -0.01
SSR1-205ENST00000475213 SNAPC2Q13487 334 aa15□□□□□ -0.01
SSR1-205ENST00000475213 NOL9Q5SY16 702 aaKnown RBP15□□□□□ -0.01
SSR1-205ENST00000475213 SIRT2Q8IXJ6 389 aa15□□□□□ -0.01
SSR1-205ENST00000475213 RPAP2Q8IXW5 612 aaPredicted RBP15□□□□□ -0.01
SSR1-205ENST00000475213 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
SSR1-205ENST00000475213 GABBR2O75899 941 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 SLURP2P0DP57 97 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 TAF1CQ15572 869 aaPredicted RBP14.99□□□□□ -0.01
SSR1-205ENST00000475213 HSP90AB4PQ58FF6 505 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 NAA16Q6N069 864 aaPredicted RBP14.99□□□□□ -0.01
SSR1-205ENST00000475213 AACSQ86V21 672 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 FOCADQ5VW36 1801 aa14.99□□□□□ -0.01
SSR1-205ENST00000475213 HTTP42858 3142 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 DOCK1Q14185 1865 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 BTBD19C9JJ37 291 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 HMMRO75330 724 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
SSR1-205ENST00000475213 RHPN1Q8TCX5 695 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 CHMP4BQ9H444 224 aaKnown RBP14.98□□□□□ -0.01
SSR1-205ENST00000475213 ZFYVE28Q9HCC9 887 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 IL1RAPL2Q9NP60 686 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 PIH1D3Q9NQM4 214 aaKnown RBP14.98□□□□□ -0.01
SSR1-205ENST00000475213 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 KCNH4Q9UQ05 1017 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 PHIPQ8WWQ0 1821 aa14.98□□□□□ -0.01
SSR1-205ENST00000475213 RGS19P49795 217 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 SP3Q02447 781 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
SSR1-205ENST00000475213 ADGRA1Q86SQ6 560 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 SCYL3Q8IZE3 742 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 CD99L2Q8TCZ2 262 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
SSR1-205ENST00000475213 ERO1AQ96HE7 468 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
SSR1-205ENST00000475213 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
SSR1-205ENST00000475213 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
SSR1-205ENST00000475213 AATFQ9NY61 560 aaKnown RBP eCLIP14.97□□□□□ -0.01
SSR1-205ENST00000475213 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 PTPRFP10586 1907 aa14.97□□□□□ -0.01
SSR1-205ENST00000475213 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms