RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 CWC27Q6UX04 472 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 HOOK2Q96ED9 719 aa16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 OSBPL5Q9H0X9 879 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 FOCADQ5VW36 1801 aa16.52■□□□□ 0.23
ERGIC3-213ENST00000475211 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 CDC45O75419 566 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 NF2P35240 595 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 TCP10Q12799 353 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 TMEM39BQ9GZU3 492 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 DHX36Q9H2U1 1008 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
ERGIC3-213ENST00000475211 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 TEPSINQ96N21 525 aa16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 DCP1AQ9NPI6 582 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 MKRN1Q9UHC7 482 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 CDK5RAP2Q96SN8 1893 aa16.5■□□□□ 0.23
ERGIC3-213ENST00000475211 TRAF5O00463 557 aa16.49■□□□□ 0.23
ERGIC3-213ENST00000475211 PRKAB2O43741 272 aa16.49■□□□□ 0.23
ERGIC3-213ENST00000475211 ZSCAN29Q8IWY8 852 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-213ENST00000475211 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
ERGIC3-213ENST00000475211 NACAP1Q9BZK3 213 aa16.49■□□□□ 0.23
ERGIC3-213ENST00000475211 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 ZNF589Q86UQ0 364 aaPredicted RBP16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 ZFPM1Q8IX07 1006 aa16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 CSRNP1Q96S65 589 aa16.48■□□□□ 0.23
ERGIC3-213ENST00000475211 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 SGSM2O43147 1006 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 APPP05067 770 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 FKBP1BP68106 108 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 NBPF12Q5TAG4 269 aaPredicted RBP16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 MCM9Q9NXL9 1143 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
ERGIC3-213ENST00000475211 ZMYM6O95789 1325 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 PPP1R12BO60237 982 aaPredicted RBP16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 CELF2O95319 508 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 TDO2P48775 406 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 EHD4Q9H223 541 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 HERC5Q9UII4 1024 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
ERGIC3-213ENST00000475211 PAPPA2Q9BXP8 1791 aa16.46■□□□□ 0.22
ERGIC3-213ENST00000475211 FOXP2O15409 715 aa16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 NAPBQ9H115 298 aa16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 ZNF408Q9H9D4 720 aa16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-213ENST00000475211 TRPM7Q96QT4 1865 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 TBC1D12O60347 775 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 ALX1Q15699 326 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 SBK1Q52WX2 424 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 C2orf69Q8N8R5 385 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 IL25Q9H293 177 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
ERGIC3-213ENST00000475211 MYH1P12882 1939 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 USP17L12C9JPN9 530 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 USP17L21D6R901 530 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 APLP1P51693 650 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 MAP3K10Q02779 954 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 CST9Q5W186 159 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
ERGIC3-213ENST00000475211 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms