RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 PCOLCE2Q9UKZ9 415 aa8.22□□□□□ -1.09
SSB-210ENST00000474273 TMEM238LA0A1B0GVL6 79 aa8.21□□□□□ -1.1
SSB-210ENST00000474273 RNGTTO60942 597 aaKnown RBP8.21□□□□□ -1.1
SSB-210ENST00000474273 GSTP1P09211 210 aaKnown RBP8.21□□□□□ -1.1
SSB-210ENST00000474273 FAAP100Q0VG06 881 aa8.21□□□□□ -1.1
SSB-210ENST00000474273 ORC1Q13415 861 aa8.21□□□□□ -1.1
SSB-210ENST00000474273 TNKS2Q9H2K2 1166 aa8.21□□□□□ -1.1
SSB-210ENST00000474273 EGFL7Q9UHF1 273 aa8.21□□□□□ -1.1
SSB-210ENST00000474273 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
SSB-210ENST00000474273 ICMTO60725 284 aa8.2□□□□□ -1.1
SSB-210ENST00000474273 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
SSB-210ENST00000474273 ZNF157P51786 506 aaPredicted RBP8.2□□□□□ -1.1
SSB-210ENST00000474273 ZSWIM9Q86XI8 627 aa8.2□□□□□ -1.1
SSB-210ENST00000474273 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
SSB-210ENST00000474273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.2□□□□□ -1.1
SSB-210ENST00000474273 SNX11Q9Y5W9 270 aa8.2□□□□□ -1.1
SSB-210ENST00000474273 CILP2Q8IUL8 1156 aa8.19□□□□□ -1.1
SSB-210ENST00000474273 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
SSB-210ENST00000474273 TRAK1Q9UPV9 953 aa8.19□□□□□ -1.1
SSB-210ENST00000474273 NEFMP07197 916 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 PDE4CQ08493 712 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 B4GALNT3Q6L9W6 998 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
SSB-210ENST00000474273 ZNF503-AS2A6NEH8 195 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 NDUFB5O43674 189 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 ITIH2P19823 946 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 ECM1Q16610 540 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 ISL2Q96A47 359 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 DNAJC25Q9H1X3 360 aa8.17□□□□□ -1.1
SSB-210ENST00000474273 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
SSB-210ENST00000474273 GADD45BO75293 160 aaPredicted RBP8.16□□□□□ -1.1
SSB-210ENST00000474273 KCNMB1Q16558 191 aa8.16□□□□□ -1.1
SSB-210ENST00000474273 ASB11Q8WXH4 323 aa8.16□□□□□ -1.1
SSB-210ENST00000474273 HEXIM2Q96MH2 286 aaKnown RBP8.16□□□□□ -1.1
SSB-210ENST00000474273 KRTAP4-11Q9BYQ6 195 aa8.16□□□□□ -1.1
SSB-210ENST00000474273 PRDM7Q9NQW5 492 aa8.16□□□□□ -1.1
SSB-210ENST00000474273 H3BRB1 525 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 GRM2Q14416 872 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 MLANAQ16655 118 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
SSB-210ENST00000474273 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSB-210ENST00000474273 TUT1Q9H6E5 874 aaKnown RBP8.15□□□□□ -1.1
SSB-210ENST00000474273 SSU72Q9NP77 194 aaKnown RBP8.15□□□□□ -1.1
SSB-210ENST00000474273 EIF1AYO14602 144 aaKnown RBP8.14□□□□□ -1.11
SSB-210ENST00000474273 ARHGAP4P98171 946 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 IKZF1Q13422 519 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
SSB-210ENST00000474273 RETREG2Q8NC44 543 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 KCNB2Q92953 911 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 TOX2Q96NM4 488 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
SSB-210ENST00000474273 IGF2BP3O00425 579 aaKnown RBP eCLIP8.13□□□□□ -1.11
SSB-210ENST00000474273 TSPAN15O95858 294 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 ERVK-24P63145 666 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 ZP2Q05996 745 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 GTF2IRD1Q9UHL9 959 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 GPN3Q9UHW5 284 aaPredicted RBP8.13□□□□□ -1.11
SSB-210ENST00000474273 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
SSB-210ENST00000474273 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.12□□□□□ -1.11
SSB-210ENST00000474273 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
SSB-210ENST00000474273 SPACA3Q8IXA5 215 aa8.12□□□□□ -1.11
SSB-210ENST00000474273 PPP1R16BQ96T49 567 aa8.12□□□□□ -1.11
SSB-210ENST00000474273 IGHA2P01877 340 aa8.11□□□□□ -1.11
SSB-210ENST00000474273 CFPP27918 469 aa8.11□□□□□ -1.11
SSB-210ENST00000474273 C1QL4Q86Z23 238 aa8.11□□□□□ -1.11
SSB-210ENST00000474273 SULF2Q8IWU5 870 aa8.11□□□□□ -1.11
SSB-210ENST00000474273 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
SSB-210ENST00000474273 GPR182O15218 404 aa8.1□□□□□ -1.11
SSB-210ENST00000474273 AFMP43652 599 aa8.1□□□□□ -1.11
SSB-210ENST00000474273 SERPINB4P48594 390 aa8.1□□□□□ -1.11
SSB-210ENST00000474273 STK35Q8TDR2 534 aa8.1□□□□□ -1.11
SSB-210ENST00000474273 NIF3L1Q9GZT8 377 aa8.1□□□□□ -1.11
SSB-210ENST00000474273 ARNTP27540 789 aa8.09□□□□□ -1.11
SSB-210ENST00000474273 CLCN7P51798 805 aa8.09□□□□□ -1.11
SSB-210ENST00000474273 FCGRTP55899 365 aa8.09□□□□□ -1.11
SSB-210ENST00000474273 NKPD1Q17RQ9 610 aa8.09□□□□□ -1.11
SSB-210ENST00000474273 ZSCAN18Q8TBC5 510 aaPredicted RBP8.09□□□□□ -1.11
SSB-210ENST00000474273 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
SSB-210ENST00000474273 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
SSB-210ENST00000474273 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 GLI1P08151 1106 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 XRCC5P13010 732 aaKnown RBP8.08□□□□□ -1.12
SSB-210ENST00000474273 FYB2Q5VWT5 728 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 MAP1SQ66K74 1059 aaPredicted RBP8.08□□□□□ -1.12
SSB-210ENST00000474273 GPBAR1Q8TDU6 330 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 LMCD1Q9NZU5 365 aa8.08□□□□□ -1.12
SSB-210ENST00000474273 ZNF865P0CJ78 1059 aaPredicted RBP8.07□□□□□ -1.12
SSB-210ENST00000474273 NME2P22392 152 aa8.07□□□□□ -1.12
SSB-210ENST00000474273 NTF4P34130 210 aa8.07□□□□□ -1.12
SSB-210ENST00000474273 ZNF252P-AS1Q0IIN9 211 aa8.07□□□□□ -1.12
SSB-210ENST00000474273 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms