RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PHKBQ93100 1093 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 CHMP4CQ96CF2 233 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 KCNQ5Q9NR82 932 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 DUOX1Q9NRD9 1551 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 PDS5AQ29RF7 1337 aaKnown RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 TIAM2Q8IVF5 1701 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 RANBP6O60518 1105 aaKnown RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 APOA5Q6Q788 366 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 DPP8Q6V1X1 898 aaPredicted RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 MPNDQ8N594 471 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 FTOQ9C0B1 505 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLK1-210ENST00000473565 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 TMEM63CQ9P1W3 806 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 SAP30BPQ9UHR5 308 aaKnown RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 SLX4Q8IY92 1834 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 LRRC37AA6NMS7 1700 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 SALL1Q9NSC2 1324 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 MAST2Q6P0Q8 1798 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 NMT2O60551 498 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 IL1R1P14778 569 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 PDCP20941 246 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 METAP2P50579 478 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLK1-210ENST00000473565 EVCP57679 992 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 CEBPZQ03701 1054 aaKnown RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 DYNLL2Q96FJ2 89 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 MASTLQ96GX5 879 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
CLK1-210ENST00000473565 DBNDD1Q9H9R9 158 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 MCM9Q9NXL9 1143 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 CPLX1O14810 134 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 USP5P45974 858 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 SPTY2D1Q68D10 685 aaPredicted RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 C15orf52Q6ZUT6 534 aaKnown RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 LLPHQ9BRT6 129 aaKnown RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 ORC3Q9UBD5 711 aaPredicted RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 ZBTB43O43298 467 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 BTDP43251 543 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 RESTQ13127 1097 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 TTC6Q86TZ1 520 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 FBXL16Q8N461 479 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 CERS5Q8N5B7 392 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 SLC44A5Q8NCS7 719 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 KRT23Q9C075 422 aa7.3□□□□□ -1.24
CLK1-210ENST00000473565 ZC3H12CQ9C0D7 883 aaKnown RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 BAZ2BQ9UIF8 2168 aaKnown RBP7.3□□□□□ -1.24
CLK1-210ENST00000473565 CCDC69A6NI79 296 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 H0YIN7 160 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 PTMSP20962 102 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 ZSCAN23Q3MJ62 389 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 NUP133Q8WUM0 1156 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 TMEM87BQ96K49 555 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 RTFDC1Q9BY42 306 aaPredicted RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 PANK2Q9BZ23 570 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 CNNM2Q9H8M5 875 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 FAM217BQ9NTX9 383 aaPredicted RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 TNKSO95271 1327 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 WDR19Q8NEZ3 1342 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 ALDH1B1P30837 517 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 SCNN1DP51172 638 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 WTAPQ15007 396 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 UBAC1Q9BSL1 405 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 ADAMTSL1Q8N6G6 1762 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 MROH7-TTC4A0A0A0MT08 1334 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 RGPD3A6NKT7 1758 aaPredicted RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 RGPD4Q7Z3J3 1758 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 SYCE3A1L190 88 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 GOLGA6L3A6NEY3 463 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 HMGN5P82970 282 aaKnown RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 ENAHQ8N8S7 591 aaPredicted RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 ESR2Q92731 530 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 RNF41Q9H4P4 317 aaPredicted RBP7.29□□□□□ -1.24
CLK1-210ENST00000473565 ANAPC4Q9UJX5 808 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 PCDHAC2Q9Y5I4 1007 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 ATP6V1DQ9Y5K8 247 aa7.29□□□□□ -1.24
CLK1-210ENST00000473565 KIAA1551Q9HCM1 1747 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 hCG_1642624A0A1W2PR95 340 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 G3V3G9 751 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 BAG6P46379 1132 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 PLCD1P51178 756 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 DCAF8Q5TAQ9 597 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 ILDR1Q86SU0 546 aaPredicted RBP7.28□□□□□ -1.24
CLK1-210ENST00000473565 SGMS1Q86VZ5 419 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 ATP8A2Q9NTI2 1148 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 LAMB1P07942 1786 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 FSD2A1L4K1 749 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 SLURP2P0DP57 97 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 HMGB2P26583 209 aaKnown RBP7.28□□□□□ -1.24
CLK1-210ENST00000473565 GUCY1A2P33402 732 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 ZNF654Q8IZM8 581 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 C8orf76Q96K31 380 aa7.28□□□□□ -1.24
CLK1-210ENST00000473565 SLC26A6Q9BXS9 759 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms