RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CACNA1HO95180 2353 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 PRRC2BQ5JSZ5 2229 aaKnown RBP8.77□□□□□ -1.01
HDAC3-206ENST00000471968 WDR87Q6ZQQ6 2873 aa8.77□□□□□ -1.01
HDAC3-206ENST00000471968 DMXL1Q9Y485 3027 aa8.77□□□□□ -1.01
HDAC3-206ENST00000471968 ASCL5Q7RTU5 278 aa8.77□□□□□ -1.01
HDAC3-206ENST00000471968 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
HDAC3-206ENST00000471968 TDRD3Q9H7E2 651 aaKnown RBP8.77□□□□□ -1.01
HDAC3-206ENST00000471968 VPS13AQ96RL7 3174 aa8.77□□□□□ -1.01
HDAC3-206ENST00000471968 ATRNL1Q5VV63 1379 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 MAST4O15021 2626 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 DNM1LO00429 736 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 RAG1P15918 1043 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 INPP5BP32019 993 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 TNNI2P48788 182 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 RAB30Q15771 203 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 SAMD1Q6SPF0 538 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 DGLUCYQ7Z3D6 616 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 ATOH1Q92858 354 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC3-206ENST00000471968 MTCH2Q9Y6C9 303 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 GVINP1Q7Z2Y8 2422 aa8.76□□□□□ -1.01
HDAC3-206ENST00000471968 MAP1BP46821 2468 aaKnown RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 POTEB3A0JP26 581 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 ANXA1P04083 346 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 ZKSCAN1P17029 563 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 DCTN1Q14203 1278 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 FAM110CQ1W6H9 321 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 KRT40Q6A162 431 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 POTEBQ6S5H4 581 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 GADL1Q6ZQY3 521 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 COPS6Q7L5N1 327 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 LRP10Q7Z4F1 713 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 RTF1Q92541 710 aaKnown RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 CCDC85AQ96PX6 553 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-206ENST00000471968 PRRX2Q99811 253 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 DAGLAQ9Y4D2 1042 aa8.75□□□□□ -1.01
HDAC3-206ENST00000471968 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 RFXAPO00287 272 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 HOXB3P14651 431 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 KLRK1P26718 216 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 CCT4P50991 539 aaKnown RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 GJC2Q5T442 439 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 FASTKD5Q7L8L6 764 aaKnown RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 ANKRD18AQ8IVF6 992 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 YBX2Q9Y2T7 364 aaKnown RBP8.74□□□□□ -1.01
HDAC3-206ENST00000471968 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 COL4A6Q14031 1691 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 FAM208BQ5VWN6 2430 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 A0A0G2JMZ2 1700 aa8.74□□□□□ -1.01
HDAC3-206ENST00000471968 CXCL11O14625 94 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 CLTBP09497 229 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 TLE2Q04725 743 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 SNX17Q15036 470 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 PROSER3Q2NL68 480 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 PPP2R2DQ66LE6 453 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 MIGA2Q7L4E1 593 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 LPAR1Q92633 364 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 JAG2Q9Y219 1238 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 ARAP2Q8WZ64 1704 aa8.73□□□□□ -1.01
HDAC3-206ENST00000471968 PRR23AA6NEV1 266 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 MYCNP04198 464 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-206ENST00000471968 IL9P15248 144 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 CACNB3P54284 484 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 PDIA6Q15084 440 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-206ENST00000471968 CCL14Q16627 93 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 CCDC152Q4G0S7 254 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 DCAF15Q66K64 600 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 ZNF341Q9BYN7 854 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 DDX20Q9UHI6 824 aaKnown RBP8.72□□□□□ -1.01
HDAC3-206ENST00000471968 SLC45A1Q9Y2W3 748 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 AK9Q5TCS8 1911 aa8.72□□□□□ -1.01
HDAC3-206ENST00000471968 A0A0G2JLL6 359 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 KBTBD13C9JR72 458 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 U2SURPO15042 1029 aaKnown RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 XRCC5P13010 732 aaKnown RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 CNGA1P29973 690 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 TMEM240Q5SV17 173 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 RASIP1Q5U651 963 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 PRRT2Q7Z6L0 340 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 RMDN1Q96DB5 314 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 HOOK2Q96ED9 719 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 POLR3GLQ9BT43 218 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms