RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	POLR3D	P05423	398 aa	Predicted RBP	12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	EPS15	P42566	896 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	NBPF9	Q3BBW0	867 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	CTR9	Q6PD62	1173 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	AMOTL1	Q8IY63	956 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	KCNB2	Q92953	911 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	ZBED3	Q96IU2	234 aa	Predicted RBP	12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	ZNF70	Q9UC06	446 aa	Predicted RBP	12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	SAP30BP	Q9UHR5	308 aa	Known RBP	12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	ZMYM6	O95789	1325 aa		12.53	□□□□□ -0.4
PUM1-208	ENST00000471894	CLRN2	A0PK11	232 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	CACNB3	P54284	484 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	PPARA	Q07869	468 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	KRT32	Q14532	448 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	KIF4B	Q2VIQ3	1234 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	TSGA10IP	Q3SY00	556 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	SBK1	Q52WX2	424 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	IDI2	Q9BXS1	227 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	DDX4	Q9NQI0	724 aa	Known RBP	12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	MKRN1	Q9UHC7	482 aa	Known RBP	12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	RBM19	Q9Y4C8	960 aa	Known RBP	12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	ECM29	Q5VYK3	1845 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	FLT1	P17948	1338 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	CDK5RAP2	Q96SN8	1893 aa		12.52	□□□□□ -0.41
PUM1-208	ENST00000471894	CYP2D7	A0A087X1C5	515 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	TCP10L2	B9ZVM9	353 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	EGFR	P00533	1210 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	PSMA5	P28066	241 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	CTDSPL2	Q05D32	466 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	TCP10	Q12799	353 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	NFIA	Q12857	509 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	SLC4A8	Q2Y0W8	1093 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	SPDYE2	Q495Y8	402 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	STK11IP	Q8N1F8	1099 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	KIF2C	Q99661	725 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	VEZT	Q9HBM0	779 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894	TAF6L	Q9Y6J9	622 aa		12.51	□□□□□ -0.41
PUM1-208	ENST00000471894		E7EWF7	191 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	ENTPD3	O75355	529 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	SLC3A2	P08195	630 aa	Known RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	CYP2D6	P10635	497 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	ADCK5	Q3MIX3	580 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	C12orf60	Q5U649	245 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	TTC6	Q86TZ1	520 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	JAKMIP1	Q96N16	626 aa	Known RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	NEK1	Q96PY6	1258 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	ADARB2	Q9NS39	739 aa	Known RBP	12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	FAM198A	Q9UFP1	575 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	HACL1	Q9UJ83	578 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	ANAPC4	Q9UJX5	808 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	MYH1	P12882	1939 aa		12.5	□□□□□ -0.41
PUM1-208	ENST00000471894	NAV1	Q8NEY1	1877 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	FOCAD	Q5VW36	1801 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	TNNI2	P48788	182 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	PLCD1	P51178	756 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	TRDN	Q13061	729 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	RABEP1	Q15276	862 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	AKNAD1	Q5T1N1	836 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	FKBP1C	Q5VVH2	108 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	MFSD6	Q6ZSS7	791 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	ZFPM1	Q8IX07	1006 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	TRPM4	Q8TD43	1214 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	IL17RA	Q96F46	866 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	DHX36	Q9H2U1	1008 aa	Known RBP	12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	RNF41	Q9H4P4	317 aa	Predicted RBP	12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	UTRN	P46939	3433 aa		12.49	□□□□□ -0.41
PUM1-208	ENST00000471894	IQCA1L	A6NCM1	817 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	SMIM22	K7EJ46	135 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	HLA-DOA	P06340	250 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	CAST	P20810	708 aa	Known RBP	12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	NEK4	P51957	841 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	HIRA	P54198	1017 aa	Predicted RBP	12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	PDE4B	Q07343	736 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	BLOC1S2	Q6QNY1	142 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	STOX1	Q6ZVD7	989 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	TBC1D10C	Q8IV04	446 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	NCOA7	Q8NI08	942 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	STAG1	Q8WVM7	1258 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	FAM151A	Q8WW52	585 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	TM6SF1	Q9BZW5	370 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	NBPF3	Q9H094	633 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	INCENP	Q9NQS7	918 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	TOMM22	Q9NS69	142 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	CYP46A1	Q9Y6A2	500 aa		12.48	□□□□□ -0.41
PUM1-208	ENST00000471894	ASTN2	O75129	1339 aa	Predicted RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	HMGB1	P09429	215 aa	Known RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	EPHX2	P34913	555 aa		12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	ANP32A	P39687	249 aa	Known RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	EVX2	Q03828	476 aa		12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	TNFAIP1	Q13829	316 aa		12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	RRP12	Q5JTH9	1297 aa	Known RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	ANGEL2	Q5VTE6	544 aa	Known RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	RUFY3	Q7L099	469 aa		12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	RALYL	Q86SE5	291 aa	Known RBP	12.47	□□□□□ -0.41
PUM1-208	ENST00000471894	FAM83A	Q86UY5	434 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms