RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CASP8Q14790 479 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 RIC3Q7Z5B4 369 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 GPATCH11Q8N954 259 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 CPLX3Q8WVH0 158 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 HNRNPLLQ8WVV9 542 aaKnown RBP15.73■□□□□ 0.11
NPHP4-207ENST00000470763 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 GOLGA8BA8MQT2 603 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 CCDC175P0C221 793 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 HSPD1P10809 573 aaKnown RBP15.73■□□□□ 0.11
NPHP4-207ENST00000470763 KIF23Q02241 960 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-207ENST00000470763 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 LONRF3Q496Y0 759 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 SPECC1Q5M775 1068 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 BRAPQ7Z569 592 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 SLIT2O94813 1529 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 KLF18A0A0U1RQI7 1052 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 CPLX1O14810 134 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 KIF4BQ2VIQ3 1234 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 ZNF569Q5MCW4 686 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-207ENST00000470763 KBTBD3Q8NAB2 608 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 HAUS7Q99871 368 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 CDC23Q9UJX2 597 aa15.73■□□□□ 0.11
NPHP4-207ENST00000470763 CORO7P57737 925 aa15.72■□□□□ 0.11
NPHP4-207ENST00000470763 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
NPHP4-207ENST00000470763 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-207ENST00000470763 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
NPHP4-207ENST00000470763 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
NPHP4-207ENST00000470763 PPM1EQ8WY54 764 aa15.72■□□□□ 0.11
NPHP4-207ENST00000470763 RAB21Q9UL25 225 aa15.72■□□□□ 0.11
NPHP4-207ENST00000470763 TRPC5Q9UL62 973 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-207ENST00000470763 LRRIQ3A6PVS8 624 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-207ENST00000470763 MYL6BP14649 208 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 USP5P45974 858 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 RAD9BQ6WBX8 426 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 UTYO14607 1347 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 SH3TC1Q8TE82 1336 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 PIK3C2AO00443 1686 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 RPS6KA5O75582 802 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 CEP112Q8N8E3 955 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 MSANTD4Q8NCY6 345 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 NEUROD6Q96NK8 337 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
NPHP4-207ENST00000470763 HPSEQ9Y251 543 aa15.71■□□□□ 0.11
NPHP4-207ENST00000470763 KIF5CO60282 957 aa15.71■□□□□ 0.1
NPHP4-207ENST00000470763 ATP2B1P20020 1258 aa15.71■□□□□ 0.1
NPHP4-207ENST00000470763 PTPN12Q05209 780 aaKnown RBP15.71■□□□□ 0.1
NPHP4-207ENST00000470763 DSCC1Q9BVC3 393 aa15.71■□□□□ 0.1
NPHP4-207ENST00000470763 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.1
NPHP4-207ENST00000470763 CDC5LQ99459 802 aaKnown RBP15.7■□□□□ 0.1
NPHP4-207ENST00000470763 MYD88Q99836 296 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 SAMSN1Q9NSI8 373 aaKnown RBP15.7■□□□□ 0.1
NPHP4-207ENST00000470763 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
NPHP4-207ENST00000470763 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
NPHP4-207ENST00000470763 ABL1P00519 1130 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 FAM71BQ8TC56 605 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 DEF6Q9H4E7 631 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 ADGRG1Q9Y653 693 aa15.7■□□□□ 0.1
NPHP4-207ENST00000470763 ABTB2Q8N961 1025 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 HPS5Q9UPZ3 1129 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 POTEB2H3BUK9 544 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 SLC35F6Q8N357 371 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 NOA1Q8NC60 698 aaKnown RBP15.69■□□□□ 0.1
NPHP4-207ENST00000470763 NCAPGQ9BPX3 1015 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 MAST3O60307 1309 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.69■□□□□ 0.1
NPHP4-207ENST00000470763 TEX33O43247 280 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 RNF40O75150 1001 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
NPHP4-207ENST00000470763 MYCBPQ99417 103 aaPredicted RBP15.69■□□□□ 0.1
NPHP4-207ENST00000470763 RXRAP19793 462 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 GCKRQ14397 625 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 SECISBP2LQ93073 1101 aaKnown RBP15.68■□□□□ 0.1
NPHP4-207ENST00000470763 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 KCNH3Q9ULD8 1083 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-207ENST00000470763 PRC1O43663 620 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 GRAMD1CQ8IYS0 662 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 GDAP1L1Q96MZ0 367 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 MRC1P22897 1456 aa15.68■□□□□ 0.1
NPHP4-207ENST00000470763 CTAGE9A4FU28 777 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-207ENST00000470763 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 RIN2Q8WYP3 895 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-207ENST00000470763 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 CTAGE15A4D2H0 777 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 CTAGE8P0CG41 777 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms