RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 HIF3AQ9Y2N7 669 aa6.36□□□□□ -1.39
TTC3-213ENST00000469939 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
TTC3-213ENST00000469939 FBXO24O75426 580 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 BMP3P12645 472 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 DRD2P14416 443 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 SOX4Q06945 474 aaPredicted RBP6.35□□□□□ -1.39
TTC3-213ENST00000469939 USP48Q86UV5 1035 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 FAM20CQ8IXL6 584 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 ZC3H12CQ9C0D7 883 aaKnown RBP6.35□□□□□ -1.39
TTC3-213ENST00000469939 STOML1Q9UBI4 398 aa6.35□□□□□ -1.39
TTC3-213ENST00000469939 ENC1O14682 589 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 ADH5P11766 374 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 NME2P22392 152 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 ARNTP27540 789 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
TTC3-213ENST00000469939 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 PDZD3Q86UT5 571 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 STK35Q8TDR2 534 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 EMILIN2Q9BXX0 1053 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 CHMP4AQ9BY43 222 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 KCNF1Q9H3M0 494 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
TTC3-213ENST00000469939 TBX22Q9Y458 520 aa6.34□□□□□ -1.39
TTC3-213ENST00000469939 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 SYNGAP1Q96PV0 1343 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 AOC2O75106 756 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 MCF2L2Q86YR7 1114 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 CLEC10AQ8IUN9 316 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
TTC3-213ENST00000469939 KCNB2Q92953 911 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 ZSWIM4Q9H7M6 989 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
TTC3-213ENST00000469939 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
TTC3-213ENST00000469939 USP31Q70CQ4 1352 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 PAGE1O75459 146 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 FGRP09769 529 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 LIG1P18858 919 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 FSTP19883 344 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 USP11P51784 963 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 SGO2Q562F6 1265 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 EGFLAMQ63HQ2 1017 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
TTC3-213ENST00000469939 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 C7orf69Q9H7B7 122 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 AP4E1Q9UPM8 1137 aa6.32□□□□□ -1.4
TTC3-213ENST00000469939 HMX2A2RU54 273 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 BTBD11A6QL63 1104 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 ZNF862O60290 1169 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 CELA3AP09093 270 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 BMP6P22004 513 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
TTC3-213ENST00000469939 RXRBP28702 533 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 GJA8P48165 433 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 KIF4BQ2VIQ3 1234 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
TTC3-213ENST00000469939 SV2BQ7L1I2 683 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 DYMQ7RTS9 669 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 TRIM42Q8IWZ5 723 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 YIPF2Q9BWQ6 316 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 OSBPL2Q9H1P3 480 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 ACTL7BQ9Y614 415 aa6.31□□□□□ -1.4
TTC3-213ENST00000469939 GSC2O15499 205 aa6.3□□□□□ -1.4
TTC3-213ENST00000469939 STK10O94804 968 aaKnown RBP6.3□□□□□ -1.4
TTC3-213ENST00000469939 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
TTC3-213ENST00000469939 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
TTC3-213ENST00000469939 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
TTC3-213ENST00000469939 CDPF1Q6NVV7 123 aa6.3□□□□□ -1.4
TTC3-213ENST00000469939 FBLIM1Q8WUP2 373 aa6.3□□□□□ -1.4
TTC3-213ENST00000469939 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.3□□□□□ -1.4
TTC3-213ENST00000469939 FAM95CA0A1B0GW59 222 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 IGLV1-40P01703 118 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 ASPAP45381 313 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 ID3Q02535 119 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 NFIAQ12857 509 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 PAK2Q13177 524 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 LRRC14Q15048 493 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 TAF1CQ15572 869 aaPredicted RBP6.29□□□□□ -1.4
TTC3-213ENST00000469939 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
TTC3-213ENST00000469939 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 RNF43Q68DV7 783 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
TTC3-213ENST00000469939 EZH1Q92800 747 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms