RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CLIC6Q96NY7 704 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 LLPHQ9BRT6 129 aaKnown RBP10.96□□□□□ -0.66
TOP3A-203ENST00000469739 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 RANBP6O60518 1105 aaKnown RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 UBE3CQ15386 1083 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 FBXO18Q8NFZ0 1043 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 AGXT2Q9BYV1 514 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 GPBP1L1Q9HC44 474 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 MYH14Q7Z406 1995 aaKnown RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 ELP1O95163 1332 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 MYRIPQ8NFW9 859 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 ZNF396Q96N95 335 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 DDX19AQ9NUU7 478 aaKnown RBP10.95□□□□□ -0.66
TOP3A-203ENST00000469739 PYCARDQ9ULZ3 195 aa10.95□□□□□ -0.66
TOP3A-203ENST00000469739 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 ARID5BQ14865 1188 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 CCDC186Q7Z3E2 898 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 FILIP1Q7Z7B0 1213 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 TXNRD3Q86VQ6 643 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 CDCA7Q9BWT1 371 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 BECN2A8MW95 431 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
TOP3A-203ENST00000469739 KRT40Q6A162 431 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 SPEF2Q9C093 1822 aa10.94□□□□□ -0.66
TOP3A-203ENST00000469739 MYSM1Q5VVJ2 828 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 AATFQ9NY61 560 aaKnown RBP eCLIP10.93□□□□□ -0.66
TOP3A-203ENST00000469739 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 NMT2O60551 498 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
TOP3A-203ENST00000469739 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 BTBD18B2RXH4 712 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 SPTLC2O15270 562 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 ZPR1O75312 459 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 SNW1Q13573 536 aaKnown RBP10.93□□□□□ -0.66
TOP3A-203ENST00000469739 ZRSR1Q15695 479 aaKnown RBP10.93□□□□□ -0.66
TOP3A-203ENST00000469739 PARP10Q53GL7 1025 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 PDILTQ8N807 584 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 IGDCC4Q8TDY8 1250 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
TOP3A-203ENST00000469739 COL4A1P02462 1669 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-203ENST00000469739 PRDX5P30044 214 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 NR5A1Q13285 461 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 FAM47AQ5JRC9 791 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 KCNF1Q9H3M0 494 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-203ENST00000469739 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 WDHD1O75717 1129 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-203ENST00000469739 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-203ENST00000469739 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 LINC00301Q8NCQ3 95 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 NACAP1Q9BZK3 213 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
TOP3A-203ENST00000469739 CYP2D6P10635 497 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 TRIM29Q14134 588 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 WTAPQ15007 396 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 CPLX2Q6PUV4 134 aaKnown RBP10.91□□□□□ -0.66
TOP3A-203ENST00000469739 MRPS27Q92552 414 aaKnown RBP10.91□□□□□ -0.66
TOP3A-203ENST00000469739 UBAC1Q9BSL1 405 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 ERICH2A1L162 156 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 VGLL3A8MV65 326 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 NOLC1Q14978 699 aaKnown RBP eCLIP10.91□□□□□ -0.66
TOP3A-203ENST00000469739 FAM84BQ96KN1 310 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-203ENST00000469739 BCL2L12Q9HB09 334 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 LRP5O75197 1615 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 USP17L21D6R901 530 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 TOM1O60784 492 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 DPCR1Q3MIW9 517 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 ANO1Q5XXA6 986 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 PRIMPOLQ96LW4 560 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-203ENST00000469739 USP21Q9UK80 565 aa10.91□□□□□ -0.66
TOP3A-203ENST00000469739 MYH7P12883 1935 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms