RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MAST2Q6P0Q8 1798 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 USP17L12C9JPN9 530 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 USP17L21D6R901 530 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 HSPA6P17066 643 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 RPS6KB1P23443 525 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 TDO2P48775 406 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 PPARAQ07869 468 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 AKNAD1Q5T1N1 836 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 CDC42EP5Q6NZY7 148 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 STOX1Q6ZVD7 989 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 NBPF3Q9H094 633 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 USP40Q9NVE5 1235 aa15.12■□□□□ 0.01
TRAF4-208ENST00000469529 F8W031 263 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-208ENST00000469529 WDHD1O75717 1129 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-208ENST00000469529 CASTP20810 708 aaKnown RBP15.11■□□□□ 0.01
TRAF4-208ENST00000469529 USP5P45974 858 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 SCNN1DP51172 638 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 TEX11Q8IYF3 940 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
TRAF4-208ENST00000469529 KRT23Q9C075 422 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 SCN9AQ15858 1988 aa15.11■□□□□ 0.01
TRAF4-208ENST00000469529 MYH13Q9UKX3 1938 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 ORC4O43929 436 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 ENTPD3O75355 529 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
TRAF4-208ENST00000469529 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 EVCP57679 992 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 TRDNQ13061 729 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 CFAP100Q494V2 611 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 GPC2Q8N158 579 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 TGFBRAP1Q8WUH2 860 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 PDRG1Q9NUG6 133 aa15.1■□□□□ 0.01
TRAF4-208ENST00000469529 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 DLGAP5Q15398 846 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 TBC1D10CQ8IV04 446 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 MB21D2Q8IYB1 491 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 PRMT6Q96LA8 375 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 UPF3BQ9BZI7 483 aaKnown RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 DHX36Q9H2U1 1008 aaKnown RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 MCM9Q9NXL9 1143 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-208ENST00000469529 FLT1P17948 1338 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 ROBO3Q96MS0 1386 aa15.09■□□□□ 0.01
TRAF4-208ENST00000469529 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
TRAF4-208ENST00000469529 MCM5P33992 734 aa15.08■□□□□ 0
TRAF4-208ENST00000469529 HAND2P61296 217 aa15.08■□□□□ 0
TRAF4-208ENST00000469529 TTC6Q86TZ1 520 aa15.08■□□□□ 0
TRAF4-208ENST00000469529 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
TRAF4-208ENST00000469529 ZSCAN31Q96LW9 406 aaPredicted RBP15.08■□□□□ 0
TRAF4-208ENST00000469529 ZNF287Q9HBT7 754 aa15.08■□□□□ 0
TRAF4-208ENST00000469529 LIMCH1Q9UPQ0 1083 aa15.08■□□□□ 0
TRAF4-208ENST00000469529 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0
TRAF4-208ENST00000469529 CD2BP2O95400 341 aaKnown RBP15.07■□□□□ 0
TRAF4-208ENST00000469529 PDE4BQ07343 736 aa15.07■□□□□ 0
TRAF4-208ENST00000469529 RALYLQ86SE5 291 aaKnown RBP15.07■□□□□ 0
TRAF4-208ENST00000469529 EHD4Q9H223 541 aa15.07■□□□□ 0
TRAF4-208ENST00000469529 TACC3Q9Y6A5 838 aa15.07■□□□□ 0
TRAF4-208ENST00000469529 PSME4Q14997 1843 aa15.07■□□□□ 0
TRAF4-208ENST00000469529 WDR90Q96KV7 1748 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 MINDY4BA8MYZ0 360 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 POTECB2RU33 542 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 DDNO94850 711 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 GMPSP49915 693 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 RBM5P52756 815 aaKnown RBP eCLIP15.06■□□□□ 0
TRAF4-208ENST00000469529 AK2P54819 239 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 GABPAQ06546 454 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 FSTL1Q12841 308 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 CUL4AQ13619 759 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 FAM83AQ86UY5 434 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 FOXP4Q8IVH2 680 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 MAPKAPK5Q8IW41 473 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 ESR2Q92731 530 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 TMEM87BQ96K49 555 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 OSBPL5Q9H0X9 879 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
TRAF4-208ENST00000469529 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 COL2A1P02458 1487 aaPredicted RBP15.06■□□□□ 0
TRAF4-208ENST00000469529 POLR3DP05423 398 aaPredicted RBP15.05■□□□□ -0
TRAF4-208ENST00000469529 LIFRP42702 1097 aa15.05■□□□□ -0
TRAF4-208ENST00000469529 APLP1P51693 650 aa15.05■□□□□ -0
TRAF4-208ENST00000469529 CTDSPL2Q05D32 466 aa15.05■□□□□ -0
TRAF4-208ENST00000469529 COL9A3Q14050 684 aaPredicted RBP15.05■□□□□ -0
TRAF4-208ENST00000469529 TOB2Q14106 344 aaPredicted RBP15.05■□□□□ -0
TRAF4-208ENST00000469529 C16orf86Q6ZW13 317 aa15.05■□□□□ -0
TRAF4-208ENST00000469529 TMTC2Q8N394 836 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms