RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RUFY2Q8WXA3 655 aa19.21■□□□□ 0.67
GPC1-207ENST00000466624 GLIS2Q9BZE0 524 aaPredicted RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 OSBPL5Q9H0X9 879 aaPredicted RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 DDX4Q9NQI0 724 aaKnown RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 FLT1P17948 1338 aa19.21■□□□□ 0.67
GPC1-207ENST00000466624 ADM5C9JUS6 153 aa19.2■□□□□ 0.66
GPC1-207ENST00000466624 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
GPC1-207ENST00000466624 ATP8A2Q9NTI2 1148 aa19.2■□□□□ 0.66
GPC1-207ENST00000466624 MKRN1Q9UHC7 482 aaKnown RBP19.2■□□□□ 0.66
GPC1-207ENST00000466624 CDC45O75419 566 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 USP5P45974 858 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 PICALMQ13492 652 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 GIMAP6Q6P9H5 292 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 SLC4A4Q9Y6R1 1079 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 PASKQ96RG2 1323 aa19.19■□□□□ 0.66
GPC1-207ENST00000466624 CASC1Q6TDU7 716 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 MAPKAPK5Q8IW41 473 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 HOOK2Q96ED9 719 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 DHX36Q9H2U1 1008 aaKnown RBP19.18■□□□□ 0.66
GPC1-207ENST00000466624 DCP1AQ9NPI6 582 aaPredicted RBP19.18■□□□□ 0.66
GPC1-207ENST00000466624 SCAF8Q9UPN6 1271 aaKnown RBP19.18■□□□□ 0.66
GPC1-207ENST00000466624 LAMB1P07942 1786 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
GPC1-207ENST00000466624 PATL2C9JE40 543 aaKnown RBP19.17■□□□□ 0.66
GPC1-207ENST00000466624 PRKAB2O43741 272 aa19.17■□□□□ 0.66
GPC1-207ENST00000466624 TCP10Q12799 353 aa19.17■□□□□ 0.66
GPC1-207ENST00000466624 SUPT20HL1Q3ZLR7 823 aa19.17■□□□□ 0.66
GPC1-207ENST00000466624 ZNF589Q86UQ0 364 aaPredicted RBP19.17■□□□□ 0.66
GPC1-207ENST00000466624 SDR42E1Q8WUS8 393 aa19.17■□□□□ 0.66
GPC1-207ENST00000466624 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
GPC1-207ENST00000466624 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
GPC1-207ENST00000466624 SGSM2O43147 1006 aa19.16■□□□□ 0.66
GPC1-207ENST00000466624 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
GPC1-207ENST00000466624 SH3BP5LQ7L8J4 393 aa19.16■□□□□ 0.66
GPC1-207ENST00000466624 ZFPM1Q8IX07 1006 aa19.16■□□□□ 0.66
GPC1-207ENST00000466624 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 PAPPA2Q9BXP8 1791 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 DDTLA6NHG4 134 aaPredicted RBP19.15■□□□□ 0.66
GPC1-207ENST00000466624 TRAF5O00463 557 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 NF2P35240 595 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 NACAP1Q9BZK3 213 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 TAOK2Q9UL54 1235 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
GPC1-207ENST00000466624 FOXP2O15409 715 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 HSPD1P10809 573 aaKnown RBP19.14■□□□□ 0.65
GPC1-207ENST00000466624 ALX1Q15699 326 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 NBPF12Q5TAG4 269 aaPredicted RBP19.14■□□□□ 0.65
GPC1-207ENST00000466624 TTC6Q86TZ1 520 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 ZSCAN29Q8IWY8 852 aaPredicted RBP19.14■□□□□ 0.65
GPC1-207ENST00000466624 IFNL3Q8IZI9 196 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 CSRNP1Q96S65 589 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 ESYT1Q9BSJ8 1104 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 IL25Q9H293 177 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
GPC1-207ENST00000466624 MCM9Q9NXL9 1143 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.65
GPC1-207ENST00000466624 LAMA4Q16363 1823 aa19.14■□□□□ 0.65
GPC1-207ENST00000466624 HLA-DOAP06340 250 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 FKBP1BP68106 108 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 MAP3K10Q02779 954 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 DLK2Q6UY11 383 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 CDAN1Q8IWY9 1227 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 AMOTL1Q8IY63 956 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 DSCC1Q9BVC3 393 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 EHD4Q9H223 541 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 PI4KBQ9UBF8 816 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 MYH8P13535 1937 aa19.13■□□□□ 0.65
GPC1-207ENST00000466624 TBC1D12O60347 775 aa19.12■□□□□ 0.65
GPC1-207ENST00000466624 APPP05067 770 aa19.12■□□□□ 0.65
GPC1-207ENST00000466624 VPS53Q5VIR6 699 aa19.12■□□□□ 0.65
GPC1-207ENST00000466624 DCAF15Q66K64 600 aa19.12■□□□□ 0.65
GPC1-207ENST00000466624 METTL16Q86W50 562 aaKnown RBP19.12■□□□□ 0.65
GPC1-207ENST00000466624 PALD1Q9ULE6 856 aa19.12■□□□□ 0.65
GPC1-207ENST00000466624 POLR3DP05423 398 aaPredicted RBP19.11■□□□□ 0.65
GPC1-207ENST00000466624 TDO2P48775 406 aa19.11■□□□□ 0.65
GPC1-207ENST00000466624 FMR1Q06787 632 aaKnown RBP eCLIP19.11■□□□□ 0.65
GPC1-207ENST00000466624 CTR9Q6PD62 1173 aa19.11■□□□□ 0.65
GPC1-207ENST00000466624 FOXP4Q8IVH2 680 aaPredicted RBP19.11■□□□□ 0.65
GPC1-207ENST00000466624 NAPBQ9H115 298 aa19.11■□□□□ 0.65
GPC1-207ENST00000466624 SAP30BPQ9UHR5 308 aaKnown RBP19.11■□□□□ 0.65
GPC1-207ENST00000466624 HERC5Q9UII4 1024 aaKnown RBP19.11■□□□□ 0.65
GPC1-207ENST00000466624 OTOFQ9HC10 1997 aa19.11■□□□□ 0.65
GPC1-207ENST00000466624 ROBO3Q96MS0 1386 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 USP17L21D6R901 530 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 PPP1R12BO60237 982 aaPredicted RBP19.1■□□□□ 0.65
GPC1-207ENST00000466624 CELF2O95319 508 aaKnown RBP19.1■□□□□ 0.65
GPC1-207ENST00000466624 MAP3K11Q16584 847 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 CST9Q5W186 159 aa19.1■□□□□ 0.65
GPC1-207ENST00000466624 UNCXA6NJT0 531 aa19.09■□□□□ 0.65
GPC1-207ENST00000466624 ZNF341Q9BYN7 854 aa19.09■□□□□ 0.65
GPC1-207ENST00000466624 ZNF408Q9H9D4 720 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms