RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 MICAL1Q8TDZ2 1067 aa10.77□□□□□ -0.69
SCAF11-205ENST00000465950 FAM13AO94988 1023 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 UTP14CQ5TAP6 766 aaKnown RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 TRIM5Q9C035 493 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 SYNCQ9H7C4 482 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 PUF60Q9UHX1 559 aaKnown RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 ZHX1Q9UKY1 873 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 TET3O43151 1660 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 PNPLA6Q8IY17 1366 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 WDR33Q9C0J8 1336 aaKnown RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 USP17L5A8MUK1 530 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 F6X3S4 739 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 VIMP08670 466 aaKnown RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 GPS2Q13227 327 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 C1orf228Q6PIY5 440 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 KANSL2Q9H9L4 492 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 ASAP1Q9ULH1 1129 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 PPP1R2P41236 205 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 ZNF713Q8N859 430 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 EPHX2P34913 555 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 USP50Q70EL3 339 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-205ENST00000465950 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 SPATA5Q8NB90 893 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 PIGBQ92521 554 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
SCAF11-205ENST00000465950 ATP8B3O60423 1300 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ZC3H13Q5T200 1668 aaKnown RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 CAPN2P17655 700 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 NOX5Q96PH1 765 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 SLC8A2Q9UPR5 921 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ZBTB1Q9Y2K1 713 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 MED14O60244 1454 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 IQSEC2Q5JU85 1478 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 DEFB115Q30KQ5 88 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 CCDC83Q8IWF9 413 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 KATNAL1Q9BW62 490 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ATG3Q9NT62 314 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 GCOM1H8Y6P7 765 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ECE2O60344 883 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 POLR2MP0CAP2 368 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 KRT10P13645 584 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ME1P48163 572 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 DEFB132Q7Z7B7 95 aa10.75□□□□□ -0.69
SCAF11-205ENST00000465950 GABPB2Q8TAK5 448 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
SCAF11-205ENST00000465950 FRMPD1Q5SYB0 1578 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 FKBP1BP68106 108 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 C1orf115Q9H7X2 142 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 CDC42EP1Q00587 391 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 MB21D1Q8N884 522 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 TMEM87BQ96K49 555 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 TULP4Q9NRJ4 1543 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 UQCRHP07919 91 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 GCLCP48506 637 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 TKFCQ3LXA3 575 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 PRPF40BQ6NWY9 871 aaKnown RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 LDHDQ86WU2 507 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 METTL23Q86XA0 190 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 SSH1Q8WYL5 1049 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 DBNDD1Q9H9R9 158 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 ATP8A2Q9NTI2 1148 aa10.74□□□□□ -0.69
SCAF11-205ENST00000465950 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-205ENST00000465950 MBD3O95983 291 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 TBC1D10BQ4KMP7 808 aaPredicted RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 PPFIBP1Q86W92 1011 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 DDX12PQ92771 950 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 CNOT7Q9UIV1 285 aaKnown RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 CCDC85CA6NKD9 419 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 BTDP43251 543 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 TMEM57Q8N5G2 664 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 PLVAPQ9BX97 442 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 KIF1BO60333 1816 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 ACTN2P35609 894 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 PRMT2P55345 433 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 RNF180Q86T96 592 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 ZNF354CQ86Y25 554 aa10.73□□□□□ -0.69
SCAF11-205ENST00000465950 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
SCAF11-205ENST00000465950 TBC1D5Q92609 795 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms