RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 MNX1P50219 401 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-215ENST00000465457 FOXO4P98177 505 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 PPIL2Q13356 520 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
HDAC6-215ENST00000465457 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 NR2E3Q9Y5X4 410 aa16.87■□□□□ 0.29
HDAC6-215ENST00000465457 GRM8O00222 908 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-215ENST00000465457 INPP5BP32019 993 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 MOGSQ13724 837 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 POLA2Q14181 598 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
HDAC6-215ENST00000465457 IPO9Q96P70 1041 aaKnown RBP16.86■□□□□ 0.29
HDAC6-215ENST00000465457 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-215ENST00000465457 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-215ENST00000465457 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
HDAC6-215ENST00000465457 A0A1W2PPC1 479 aa16.85■□□□□ 0.29
HDAC6-215ENST00000465457 PDHXO00330 501 aa16.85■□□□□ 0.29
HDAC6-215ENST00000465457 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
HDAC6-215ENST00000465457 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
HDAC6-215ENST00000465457 EVI5O60447 810 aa16.84■□□□□ 0.29
HDAC6-215ENST00000465457 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-215ENST00000465457 ELNP15502 786 aa16.84■□□□□ 0.29
HDAC6-215ENST00000465457 TNNI2P48788 182 aa16.84■□□□□ 0.29
HDAC6-215ENST00000465457 IFIT5Q13325 482 aaKnown RBP16.84■□□□□ 0.29
HDAC6-215ENST00000465457 MIGA2Q7L4E1 593 aa16.84■□□□□ 0.29
HDAC6-215ENST00000465457 DIS3LQ8TF46 1054 aaKnown RBP16.84■□□□□ 0.29
HDAC6-215ENST00000465457 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-215ENST00000465457 CYP2C8P10632 490 aa16.83■□□□□ 0.28
HDAC6-215ENST00000465457 FAM84BQ96KN1 310 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-215ENST00000465457 COL25A1Q9BXS0 654 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-215ENST00000465457 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
HDAC6-215ENST00000465457 LAMA2P24043 3122 aaKnown RBP16.83■□□□□ 0.28
HDAC6-215ENST00000465457 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 PNMA6EA0A0J9YXQ4 647 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 SGPL1O95470 568 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 BCRP11274 1271 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 ANKRD23Q86SG2 305 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 PLEKHM2Q8IWE5 1019 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 DEFB123Q8N688 67 aa16.82■□□□□ 0.28
HDAC6-215ENST00000465457 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
HDAC6-215ENST00000465457 INHAP05111 366 aa16.81■□□□□ 0.28
HDAC6-215ENST00000465457 UBXN2AP68543 259 aa16.81■□□□□ 0.28
HDAC6-215ENST00000465457 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-215ENST00000465457 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
HDAC6-215ENST00000465457 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
HDAC6-215ENST00000465457 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
HDAC6-215ENST00000465457 ZMYND8Q9ULU4 1186 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-215ENST00000465457 RPAP1Q9BWH6 1393 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-215ENST00000465457 HOXD10P28358 340 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
HDAC6-215ENST00000465457 PPATQ06203 517 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 LDHAL6AQ6ZMR3 332 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 C7orf61Q8IZ16 206 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 PAWRQ96IZ0 340 aaKnown RBP16.8■□□□□ 0.28
HDAC6-215ENST00000465457 GDF15Q99988 308 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
HDAC6-215ENST00000465457 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
HDAC6-215ENST00000465457 ADCY3O60266 1144 aa16.79■□□□□ 0.28
HDAC6-215ENST00000465457 CDC45O75419 566 aa16.79■□□□□ 0.28
HDAC6-215ENST00000465457 FCGRTP55899 365 aa16.79■□□□□ 0.28
HDAC6-215ENST00000465457 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
HDAC6-215ENST00000465457 GPAT2Q6NUI2 795 aa16.79■□□□□ 0.28
HDAC6-215ENST00000465457 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
HDAC6-215ENST00000465457 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
HDAC6-215ENST00000465457 SYN1P17600 705 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 FLT3LGP49771 235 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 BCAMP50895 628 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 TEKT1Q969V4 418 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-215ENST00000465457 MTMR10Q9NXD2 777 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 STXBP5LQ9Y2K9 1186 aa16.78■□□□□ 0.28
HDAC6-215ENST00000465457 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.28
HDAC6-215ENST00000465457 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
HDAC6-215ENST00000465457 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
HDAC6-215ENST00000465457 PARK7Q99497 189 aaKnown RBP16.77■□□□□ 0.28
HDAC6-215ENST00000465457 DOCK1Q14185 1865 aa16.77■□□□□ 0.27
HDAC6-215ENST00000465457 PLXNB2O15031 1838 aa16.77■□□□□ 0.27
HDAC6-215ENST00000465457 UBE4AQ14139 1066 aa16.76■□□□□ 0.27
HDAC6-215ENST00000465457 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
HDAC6-215ENST00000465457 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
HDAC6-215ENST00000465457 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
HDAC6-215ENST00000465457 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
HDAC6-215ENST00000465457 SALL3Q9BXA9 1300 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 APBB1O00213 710 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 MX1P20591 662 aa16.75■□□□□ 0.27
HDAC6-215ENST00000465457 PDE1AP54750 535 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms