RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 SH3BP5LQ7L8J4 393 aa14.34□□□□□ -0.11
APTX-213ENST00000465003 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
APTX-213ENST00000465003 A0A0D9SFI3 127 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 SMIM22K7EJ46 135 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 SDSP20132 328 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 APLP1P51693 650 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 GRM1Q13255 1194 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 FLT1P17948 1338 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 FOCADQ5VW36 1801 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 BAZ2AQ9UIF9 1905 aaKnown RBP14.33□□□□□ -0.12
APTX-213ENST00000465003 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 PALD1Q9ULE6 856 aa14.33□□□□□ -0.12
APTX-213ENST00000465003 HSPA6P17066 643 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 USP5P45974 858 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 TNNI2P48788 182 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 PPP4CP60510 307 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 APPBP2Q92624 585 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 IL25Q9H293 177 aa14.32□□□□□ -0.12
APTX-213ENST00000465003 TMEM88BA6NKF7 163 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 MKRN1Q9UHC7 482 aaKnown RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 GPAA1O43292 621 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 CWC27Q6UX04 472 aaKnown RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 FAM83AQ86UY5 434 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 FAM151AQ8WW52 585 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 ANGEL1Q9UNK9 670 aaKnown RBP14.31□□□□□ -0.12
APTX-213ENST00000465003 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
APTX-213ENST00000465003 MYH1P12882 1939 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 SIPA1L1O43166 1804 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 CYP2D7A0A087X1C5 515 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 CYP2D6P10635 497 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 ZMYM1Q5SVZ6 1142 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 OTOFQ9HC10 1997 aa14.3□□□□□ -0.12
APTX-213ENST00000465003 PLCG2P16885 1265 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 NF2P35240 595 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 HUNKP57058 714 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 FKBP1CQ5VVH2 108 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 CLMNQ96JQ2 1002 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 PPP2R3BQ9Y5P8 575 aa14.29□□□□□ -0.12
APTX-213ENST00000465003 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
APTX-213ENST00000465003 ENTPD3O75355 529 aa14.28□□□□□ -0.12
APTX-213ENST00000465003 PLCD1P51178 756 aa14.28□□□□□ -0.12
APTX-213ENST00000465003 SHROOM1Q2M3G4 852 aaPredicted RBP14.28□□□□□ -0.12
APTX-213ENST00000465003 C2orf69Q8N8R5 385 aa14.28□□□□□ -0.12
APTX-213ENST00000465003 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
APTX-213ENST00000465003 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
APTX-213ENST00000465003 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
APTX-213ENST00000465003 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.12
APTX-213ENST00000465003 APPP05067 770 aa14.27□□□□□ -0.12
APTX-213ENST00000465003 SUPT20HL1Q3ZLR7 823 aa14.27□□□□□ -0.12
APTX-213ENST00000465003 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.12
APTX-213ENST00000465003 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.12
APTX-213ENST00000465003 PAPPA2Q9BXP8 1791 aa14.27□□□□□ -0.12
APTX-213ENST00000465003 ATRNL1Q5VV63 1379 aa14.27□□□□□ -0.12
APTX-213ENST00000465003 FOXP2O15409 715 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 INPP5BP32019 993 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 WRNIP1Q96S55 665 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 DNAJC18Q9H819 358 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 TLL2Q9Y6L7 1015 aa14.27□□□□□ -0.13
APTX-213ENST00000465003 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.13
APTX-213ENST00000465003 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
APTX-213ENST00000465003 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
APTX-213ENST00000465003 PPP1R12BO60237 982 aaPredicted RBP14.25□□□□□ -0.13
APTX-213ENST00000465003 RRP1BQ14684 758 aaKnown RBP14.25□□□□□ -0.13
APTX-213ENST00000465003 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
APTX-213ENST00000465003 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
APTX-213ENST00000465003 SLC44A5Q8NCS7 719 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 USP17L21D6R901 530 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
APTX-213ENST00000465003 CHMLP26374 656 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 MCMDC2Q4G0Z9 681 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 ZIC5Q96T25 663 aa14.25□□□□□ -0.13
APTX-213ENST00000465003 IGSF3O75054 1194 aa14.24□□□□□ -0.13
APTX-213ENST00000465003 VGLL4Q14135 290 aa14.24□□□□□ -0.13
APTX-213ENST00000465003 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms