RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
GYPC-205ENST00000464053 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
GYPC-205ENST00000464053 MAPKAPK5Q8IW41 473 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 ANAPC4Q9UJX5 808 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 LIMCH1Q9UPQ0 1083 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 PLCG2P16885 1265 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 ANTXR2P58335 489 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 CXCL9Q07325 125 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 STAG1Q8WVM7 1258 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 TPCN1Q9ULQ1 816 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
GYPC-205ENST00000464053 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 B4E1Z4 1266 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
GYPC-205ENST00000464053 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 RALYLQ86SE5 291 aaKnown RBP18.27■□□□□ 0.52
GYPC-205ENST00000464053 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
GYPC-205ENST00000464053 HDLBPQ00341 1268 aaKnown RBP18.26■□□□□ 0.51
GYPC-205ENST00000464053 TRDNQ13061 729 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 SBK1Q52WX2 424 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 GMLQ99445 158 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
GYPC-205ENST00000464053 USP40Q9NVE5 1235 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
GYPC-205ENST00000464053 PRC1O43663 620 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 MCM5P33992 734 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 CUL4AQ13619 759 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 ME3Q16798 604 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
GYPC-205ENST00000464053 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
GYPC-205ENST00000464053 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
GYPC-205ENST00000464053 FLT1P17948 1338 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 MYH1P12882 1939 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 RBM5P52756 815 aaKnown RBP eCLIP18.25■□□□□ 0.51
GYPC-205ENST00000464053 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 BRF1Q92994 677 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 AGXT2Q9BYV1 514 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 UTRNP46939 3433 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
GYPC-205ENST00000464053 KDM4AO75164 1064 aa18.24■□□□□ 0.51
GYPC-205ENST00000464053 WDHD1O75717 1129 aaPredicted RBP18.24■□□□□ 0.51
GYPC-205ENST00000464053 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
GYPC-205ENST00000464053 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
GYPC-205ENST00000464053 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
GYPC-205ENST00000464053 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
GYPC-205ENST00000464053 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
GYPC-205ENST00000464053 DDIT3P35638 169 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 FGD1P98174 961 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 CIAPIN1Q6FI81 312 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 KRT23Q9C075 422 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 RNF41Q9H4P4 317 aaPredicted RBP18.23■□□□□ 0.51
GYPC-205ENST00000464053 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 PRDM1O75626 825 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 FGRP09769 529 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 PLCD1P51178 756 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 APOBRQ0VD83 1088 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 PICALMQ13492 652 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 CFAP100Q494V2 611 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
GYPC-205ENST00000464053 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
GYPC-205ENST00000464053 CACNB3P54284 484 aa18.22■□□□□ 0.51
GYPC-205ENST00000464053 NFIAQ12857 509 aa18.22■□□□□ 0.51
GYPC-205ENST00000464053 NECAB1Q8N987 351 aa18.22■□□□□ 0.51
GYPC-205ENST00000464053 DYNLL2Q96FJ2 89 aa18.22■□□□□ 0.51
GYPC-205ENST00000464053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.22■□□□□ 0.51
GYPC-205ENST00000464053 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
GYPC-205ENST00000464053 FZD9O00144 591 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.516e-12■■□□□ 12.7
GYPC-205ENST00000464053 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 AGBL3Q8NEM8 1001 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 PRMT6Q96LA8 375 aaPredicted RBP18.21■□□□□ 0.51
GYPC-205ENST00000464053 SBF1O95248 1867 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 DTNBO60941 627 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 POLR3DP05423 398 aaPredicted RBP18.21■□□□□ 0.51
GYPC-205ENST00000464053 STK3Q13188 491 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
GYPC-205ENST00000464053 SH2B1Q9NRF2 756 aaPredicted RBP18.21■□□□□ 0.51
GYPC-205ENST00000464053 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 TNIP1Q15025 636 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 ZKSCAN3Q9BRR0 538 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 TDRD3Q9H7E2 651 aaKnown RBP18.2■□□□□ 0.5
GYPC-205ENST00000464053 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 ROBO3Q96MS0 1386 aa18.2■□□□□ 0.5
GYPC-205ENST00000464053 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 SH2B2O14492 632 aaPredicted RBP18.19■□□□□ 0.5
GYPC-205ENST00000464053 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
GYPC-205ENST00000464053 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms