RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
SNRNP40-203ENST00000463988 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
SNRNP40-203ENST00000463988 HTTP42858 3142 aa17.69■□□□□ 0.42
SNRNP40-203ENST00000463988 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
SNRNP40-203ENST00000463988 CXCL11O14625 94 aa17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 RHBDL3P58872 404 aa17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 CAP1Q01518 475 aa17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 NSUN4Q96CB9 384 aaKnown RBP17.68■□□□□ 0.42
SNRNP40-203ENST00000463988 ZBTB7BO15156 539 aaPredicted RBP17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 IGSF3O75054 1194 aa17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 MCAMP43121 646 aa17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 SCYL3Q8IZE3 742 aa17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
SNRNP40-203ENST00000463988 DOCK2Q92608 1830 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 KIAA0100Q14667 2235 aaKnown RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 TBC1D12O60347 775 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 CTNND1O60716 968 aaKnown RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 SURF6O75683 361 aaKnown RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 GNRH1P01148 92 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 RLBP1P12271 317 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 LACTBP83111 547 aaPredicted RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 MOGSQ13724 837 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 KIF22Q14807 665 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 TNNI3KQ59H18 835 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 ITPRIPQ8IWB1 547 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 FPGT-TNNI3KV9GXZ4 949 aa17.66■□□□□ 0.42
SNRNP40-203ENST00000463988 PDHXO00330 501 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 PTPRAP18433 802 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 PICALMQ13492 652 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 C17orf99Q6UX52 265 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
SNRNP40-203ENST00000463988 COL2A1P02458 1487 aaPredicted RBP17.64■□□□□ 0.41
SNRNP40-203ENST00000463988 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
SNRNP40-203ENST00000463988 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
SNRNP40-203ENST00000463988 ZHX2Q9Y6X8 837 aa17.64■□□□□ 0.41
SNRNP40-203ENST00000463988 PRMT2P55345 433 aa17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 FASTKD5Q7L8L6 764 aaKnown RBP17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 DBNDD2Q9BQY9 259 aa17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 AFG3L2Q9Y4W6 797 aa17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 ADGRA2Q96PE1 1338 aa17.63■□□□□ 0.41
SNRNP40-203ENST00000463988 A0A0G2JLL6 359 aaPredicted RBP17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 GPAT2Q6NUI2 795 aa17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 PRRT2Q7Z6L0 340 aaPredicted RBP17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 PARK7Q99497 189 aaKnown RBP17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
SNRNP40-203ENST00000463988 BAG3O95817 575 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 MS4A1P11836 297 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 PLCG2P16885 1265 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 PPP4CP60510 307 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 NOL10Q9BSC4 688 aaKnown RBP17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
SNRNP40-203ENST00000463988 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 CYP2E1P05181 493 aaPredicted RBP17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 PRPF38BQ5VTL8 546 aaKnown RBP17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 DBNLQ9UJU6 430 aaKnown RBP17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 RBBP6Q7Z6E9 1792 aaKnown RBP17.6■□□□□ 0.41
SNRNP40-203ENST00000463988 BCRP11274 1271 aa17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 HOXD10P28358 340 aa17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 SH3RF3Q8TEJ3 882 aaPredicted RBP17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 EAF2Q96CJ1 260 aaPredicted RBP17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 TBC1D2Q9BYX2 928 aa17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 DHX36Q9H2U1 1008 aaKnown RBP17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 HERC5Q9UII4 1024 aaKnown RBP17.59■□□□□ 0.41
SNRNP40-203ENST00000463988 DOCK1Q14185 1865 aa17.58■□□□□ 0.41
SNRNP40-203ENST00000463988 CENPFP49454 3210 aa17.58■□□□□ 0.41
SNRNP40-203ENST00000463988 SLURP2P0DP57 97 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 PSMC4P43686 418 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 PANK1Q8TE04 598 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 TRIM47Q96LD4 638 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 PI4KBQ9UBF8 816 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 SRRDQ9UH36 339 aa17.58■□□□□ 0.4
SNRNP40-203ENST00000463988 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
SNRNP40-203ENST00000463988 CYP2C8P10632 490 aa17.57■□□□□ 0.4
SNRNP40-203ENST00000463988 ZAP70P43403 619 aa17.57■□□□□ 0.4
SNRNP40-203ENST00000463988 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms