RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 FZD1Q9UP38 647 aa22.86■■□□□ 1.25
LMNB1-204ENST00000463908 SUPT20HL1Q3ZLR7 823 aa22.85■■□□□ 1.25
LMNB1-204ENST00000463908 APPBP2Q92624 585 aa22.85■■□□□ 1.25
LMNB1-204ENST00000463908 SEC62Q99442 399 aaKnown RBP22.85■■□□□ 1.25
LMNB1-204ENST00000463908 GBA2Q9HCG7 927 aaPredicted RBP22.85■■□□□ 1.25
LMNB1-204ENST00000463908 SSC5DA1L4H1 1573 aa22.84■■□□□ 1.25
LMNB1-204ENST00000463908 DDTLA6NHG4 134 aaPredicted RBP22.84■■□□□ 1.25
LMNB1-204ENST00000463908 MBD4O95243 580 aa22.84■■□□□ 1.25
LMNB1-204ENST00000463908 HSPA1AP0DMV8 641 aaKnown RBP22.84■■□□□ 1.25
LMNB1-204ENST00000463908 HSPA1BP0DMV9 641 aaKnown RBP22.84■■□□□ 1.25
LMNB1-204ENST00000463908 ZMYM1Q5SVZ6 1142 aa22.84■■□□□ 1.25
LMNB1-204ENST00000463908 CERS3Q8IU89 383 aa22.84■■□□□ 1.25
LMNB1-204ENST00000463908 MAPKAPK5Q8IW41 473 aa22.84■■□□□ 1.25
LMNB1-204ENST00000463908 M0R2C6 588 aa22.83■■□□□ 1.25
LMNB1-204ENST00000463908 PRKAB2O43741 272 aa22.83■■□□□ 1.25
LMNB1-204ENST00000463908 PRKG1Q13976 671 aa22.83■■□□□ 1.25
LMNB1-204ENST00000463908 LRRFIP1Q32MZ4 808 aaKnown RBP22.83■■□□□ 1.25
LMNB1-204ENST00000463908 STRBPQ96SI9 672 aaKnown RBP22.83■■□□□ 1.25
LMNB1-204ENST00000463908 OSBPL5Q9H0X9 879 aaPredicted RBP22.83■■□□□ 1.25
LMNB1-204ENST00000463908 MKRN1Q9UHC7 482 aaKnown RBP22.83■■□□□ 1.25
LMNB1-204ENST00000463908 FLT1P17948 1338 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 TRPM7Q96QT4 1865 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 RPAP1Q9BWH6 1393 aaPredicted RBP22.82■■□□□ 1.24
LMNB1-204ENST00000463908 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
LMNB1-204ENST00000463908 SLURP2P0DP57 97 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 SDSP20132 328 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 SAPCD2Q86UD0 394 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 TICAM2Q86XR7 235 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 C2orf69Q8N8R5 385 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 TLL2Q9Y6L7 1015 aa22.82■■□□□ 1.24
LMNB1-204ENST00000463908 NF2P35240 595 aa22.81■■□□□ 1.24
LMNB1-204ENST00000463908 MIGA2Q7L4E1 593 aa22.81■■□□□ 1.24
LMNB1-204ENST00000463908 UBE2Q2LH0YL09 131 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 USP5P45974 858 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 FKBP1BP68106 108 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 SDR42E1Q8WUS8 393 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 AIDAQ96BJ3 306 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 FAM227BQ96M60 508 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 CRNKL1Q9BZJ0 848 aaKnown RBP22.8■■□□□ 1.24
LMNB1-204ENST00000463908 MYH7P12883 1935 aa22.8■■□□□ 1.24
LMNB1-204ENST00000463908 ATRNL1Q5VV63 1379 aa22.79■■□□□ 1.24
LMNB1-204ENST00000463908 MAP3K10Q02779 954 aa22.79■■□□□ 1.24
LMNB1-204ENST00000463908 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
LMNB1-204ENST00000463908 ZSCAN29Q8IWY8 852 aaPredicted RBP22.79■■□□□ 1.24
LMNB1-204ENST00000463908 CSRNP1Q96S65 589 aa22.79■■□□□ 1.24
LMNB1-204ENST00000463908 PALD1Q9ULE6 856 aa22.79■■□□□ 1.24
LMNB1-204ENST00000463908 ABT1Q9ULW3 272 aaKnown RBP22.79■■□□□ 1.24
LMNB1-204ENST00000463908 ANGEL1Q9UNK9 670 aaKnown RBP22.79■■□□□ 1.24
LMNB1-204ENST00000463908 GPAA1O43292 621 aa22.78■■□□□ 1.24
LMNB1-204ENST00000463908 PPP1R12BO60237 982 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-204ENST00000463908 HUNKP57058 714 aa22.78■■□□□ 1.24
LMNB1-204ENST00000463908 NMIQ13287 307 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-204ENST00000463908 TTLL12Q14166 644 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-204ENST00000463908 LDLRAD1Q5T700 205 aa22.78■■□□□ 1.24
LMNB1-204ENST00000463908 DCP1AQ9NPI6 582 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-204ENST00000463908 SAP30BPQ9UHR5 308 aaKnown RBP22.78■■□□□ 1.24
LMNB1-204ENST00000463908 A0A0D9SFI3 127 aa22.77■■□□□ 1.24
LMNB1-204ENST00000463908 RASSF10A6NK89 507 aa22.77■■□□□ 1.24
LMNB1-204ENST00000463908 HELLSQ9NRZ9 838 aa22.77■■□□□ 1.24
LMNB1-204ENST00000463908 SLC4A4Q9Y6R1 1079 aa22.77■■□□□ 1.24
LMNB1-204ENST00000463908 CDK5RAP2Q96SN8 1893 aa22.77■■□□□ 1.24
LMNB1-204ENST00000463908 GSG1L2A8MUP6 293 aa22.76■■□□□ 1.23
LMNB1-204ENST00000463908 DEFB115Q30KQ5 88 aa22.76■■□□□ 1.23
LMNB1-204ENST00000463908 CCDC129Q6ZRS4 1044 aa22.76■■□□□ 1.23
LMNB1-204ENST00000463908 ARMC9Q7Z3E5 817 aa22.76■■□□□ 1.23
LMNB1-204ENST00000463908 DHX36Q9H2U1 1008 aaKnown RBP22.76■■□□□ 1.23
LMNB1-204ENST00000463908 ATP8A2Q9NTI2 1148 aa22.76■■□□□ 1.23
LMNB1-204ENST00000463908 COL2A1P02458 1487 aaPredicted RBP22.76■■□□□ 1.23
LMNB1-204ENST00000463908 EVX2Q03828 476 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 MCMDC2Q4G0Z9 681 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 HOOK2Q96ED9 719 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 HHIPL1Q96JK4 782 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 PI4KBQ9UBF8 816 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 ZNF112Q9UJU3 913 aa22.75■■□□□ 1.23
LMNB1-204ENST00000463908 PAPPA2Q9BXP8 1791 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 FOCADQ5VW36 1801 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 PHF20L1A8MW92 1017 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 PATL2C9JE40 543 aaKnown RBP22.74■■□□□ 1.23
LMNB1-204ENST00000463908 TBC1D12O60347 775 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 PLCD1P51178 756 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 SLC4A8Q2Y0W8 1093 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 DCAF15Q66K64 600 aa22.74■■□□□ 1.23
LMNB1-204ENST00000463908 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
LMNB1-204ENST00000463908 METTL16Q86W50 562 aaKnown RBP22.74■■□□□ 1.23
LMNB1-204ENST00000463908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.74■■□□□ 1.23
LMNB1-204ENST00000463908 FAM196BA6NMK8 535 aa22.73■■□□□ 1.23
LMNB1-204ENST00000463908 FOXP2O15409 715 aa22.73■■□□□ 1.23
LMNB1-204ENST00000463908 IREB2P48200 963 aaKnown RBP22.73■■□□□ 1.23
LMNB1-204ENST00000463908 CWC27Q6UX04 472 aaKnown RBP22.73■■□□□ 1.23
LMNB1-204ENST00000463908 FOXP4Q8IVH2 680 aaPredicted RBP22.73■■□□□ 1.23
LMNB1-204ENST00000463908 CLMNQ96JQ2 1002 aa22.73■■□□□ 1.23
LMNB1-204ENST00000463908 ZNF341Q9BYN7 854 aa22.73■■□□□ 1.23
LMNB1-204ENST00000463908 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
LMNB1-204ENST00000463908 SMIM22K7EJ46 135 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 CYP2D6P10635 497 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 CHMLP26374 656 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 MAP3K9P80192 1104 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 BMP2KLQ5H9B9 411 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 RGMBQ6NW40 437 aa22.72■■□□□ 1.23
LMNB1-204ENST00000463908 ZNF589Q86UQ0 364 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms