RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TESPA1A2RU30 521 aaPredicted RBP12.46□□□□□ -0.41
SF3A3-204ENST00000462258 GPR25O00155 361 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 LDHCP07864 332 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 RHBDL3P58872 404 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 C20orf194Q5TEA3 1177 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
SF3A3-204ENST00000462258 AACSQ86V21 672 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 ZFPM1Q8IX07 1006 aa12.46□□□□□ -0.41
SF3A3-204ENST00000462258 RPAP2Q8IXW5 612 aaPredicted RBP12.46□□□□□ -0.41
SF3A3-204ENST00000462258 ZNF512BQ96KM6 892 aaPredicted RBP12.46□□□□□ -0.41
SF3A3-204ENST00000462258 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
SF3A3-204ENST00000462258 NAV1Q8NEY1 1877 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 CYP2E1P05181 493 aaPredicted RBP12.45□□□□□ -0.42
SF3A3-204ENST00000462258 INPP5BP32019 993 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 ZAP70P43403 619 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 GTF2A2P52657 109 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 PPIL2Q13356 520 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 CCL15Q16663 113 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
SF3A3-204ENST00000462258 ZSCAN29Q8IWY8 852 aaPredicted RBP12.45□□□□□ -0.42
SF3A3-204ENST00000462258 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 BRI3BPQ8WY22 251 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
SF3A3-204ENST00000462258 R3HDMLQ9H3Y0 253 aa12.45□□□□□ -0.42
SF3A3-204ENST00000462258 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
SF3A3-204ENST00000462258 CCDC85CA6NKD9 419 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 APBB1O00213 710 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 FKTNO75072 461 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 MAP4K4O95819 1239 aaPredicted RBP12.44□□□□□ -0.42
SF3A3-204ENST00000462258 CRHR2Q13324 411 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
SF3A3-204ENST00000462258 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 PTPN18Q99952 460 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 ZNF112Q9UJU3 913 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 MYH7P12883 1935 aa12.44□□□□□ -0.42
SF3A3-204ENST00000462258 MYH1P12882 1939 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 DDTLA6NHG4 134 aaPredicted RBP12.43□□□□□ -0.42
SF3A3-204ENST00000462258 IRF6O14896 467 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
SF3A3-204ENST00000462258 PPATQ06203 517 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 SNAPC2Q13487 334 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 OSBPL5Q9H0X9 879 aaPredicted RBP12.43□□□□□ -0.42
SF3A3-204ENST00000462258 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
SF3A3-204ENST00000462258 AATFQ9NY61 560 aaKnown RBP eCLIP12.43□□□□□ -0.42
SF3A3-204ENST00000462258 ZSWIM8A7E2V4 1837 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
SF3A3-204ENST00000462258 IGSF3O75054 1194 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
SF3A3-204ENST00000462258 BAG3O95817 575 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 CETPP11597 493 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
SF3A3-204ENST00000462258 ADGRA1Q86SQ6 560 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
SF3A3-204ENST00000462258 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
SF3A3-204ENST00000462258 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
SF3A3-204ENST00000462258 HTTP42858 3142 aa12.41□□□□□ -0.42
SF3A3-204ENST00000462258 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
SF3A3-204ENST00000462258 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
SF3A3-204ENST00000462258 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
SF3A3-204ENST00000462258 PLCG2P16885 1265 aa12.41□□□□□ -0.42
SF3A3-204ENST00000462258 FLT1P17948 1338 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
SF3A3-204ENST00000462258 MAP3K10Q02779 954 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
SF3A3-204ENST00000462258 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.42
SF3A3-204ENST00000462258 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 ANTXR1Q9H6X2 564 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 ZFYVE28Q9HCC9 887 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
SF3A3-204ENST00000462258 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
SF3A3-204ENST00000462258 CYP7A1P22680 504 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 PPP4CP60510 307 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 MAPKAPK5Q8IW41 473 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
SF3A3-204ENST00000462258 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
SF3A3-204ENST00000462258 TBC1D12O60347 775 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 PTPRAP18433 802 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 SP3Q02447 781 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms