RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 PTPN22Q9Y2R2 807 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 FPGT-TNNI3KV9GXZ4 949 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 LDHCP07864 332 aa21.76■■□□□ 1.07
COL1A2-202ENST00000461525 MCAMP43121 646 aa21.76■■□□□ 1.07
COL1A2-202ENST00000461525 SH3BP5LQ7L8J4 393 aa21.76■■□□□ 1.07
COL1A2-202ENST00000461525 ZNF384Q8TF68 577 aa21.76■■□□□ 1.07
COL1A2-202ENST00000461525 NSUN4Q96CB9 384 aaKnown RBP21.76■■□□□ 1.07
COL1A2-202ENST00000461525 DDX4Q9NQI0 724 aaKnown RBP21.76■■□□□ 1.07
COL1A2-202ENST00000461525 KCNH4Q9UQ05 1017 aa21.76■■□□□ 1.07
COL1A2-202ENST00000461525 ZBTB7BO15156 539 aaPredicted RBP21.75■■□□□ 1.07
COL1A2-202ENST00000461525 TLR2O60603 784 aa21.75■■□□□ 1.07
COL1A2-202ENST00000461525 RHBDL3P58872 404 aa21.75■■□□□ 1.07
COL1A2-202ENST00000461525 TTC39AQ5SRH9 613 aa21.75■■□□□ 1.07
COL1A2-202ENST00000461525 LRP2BPQ9P2M1 347 aa21.75■■□□□ 1.07
COL1A2-202ENST00000461525 DDTLA6NHG4 134 aaPredicted RBP21.74■■□□□ 1.07
COL1A2-202ENST00000461525 CAP1Q01518 475 aa21.74■■□□□ 1.07
COL1A2-202ENST00000461525 CCDC158Q5M9N0 1113 aa21.74■■□□□ 1.07
COL1A2-202ENST00000461525 ANKRD23Q86SG2 305 aa21.74■■□□□ 1.07
COL1A2-202ENST00000461525 DBNDD2Q9BQY9 259 aa21.74■■□□□ 1.07
COL1A2-202ENST00000461525 PICK1Q9NRD5 415 aa21.74■■□□□ 1.07
COL1A2-202ENST00000461525 PHF20L1A8MW92 1017 aa21.73■■□□□ 1.07
COL1A2-202ENST00000461525 MAP4K4O95819 1239 aaPredicted RBP21.73■■□□□ 1.07
COL1A2-202ENST00000461525 SCYL3Q8IZE3 742 aa21.73■■□□□ 1.07
COL1A2-202ENST00000461525 SNRKQ9NRH2 765 aa21.73■■□□□ 1.07
COL1A2-202ENST00000461525 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
COL1A2-202ENST00000461525 NPM3O75607 178 aaKnown RBP21.72■■□□□ 1.07
COL1A2-202ENST00000461525 MAP3K10Q02779 954 aa21.72■■□□□ 1.07
COL1A2-202ENST00000461525 PDHXO00330 501 aa21.71■■□□□ 1.07
COL1A2-202ENST00000461525 CXCL11O14625 94 aa21.71■■□□□ 1.07
COL1A2-202ENST00000461525 KIF22Q14807 665 aa21.71■■□□□ 1.07
COL1A2-202ENST00000461525 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.07
COL1A2-202ENST00000461525 PTPRAP18433 802 aa21.7■■□□□ 1.06
COL1A2-202ENST00000461525 LACTBP83111 547 aaPredicted RBP21.7■■□□□ 1.06
COL1A2-202ENST00000461525 CEP85Q6P2H3 762 aa21.7■■□□□ 1.06
COL1A2-202ENST00000461525 PANK1Q8TE04 598 aa21.7■■□□□ 1.06
COL1A2-202ENST00000461525 ARMC5Q96C12 935 aa21.7■■□□□ 1.06
COL1A2-202ENST00000461525 NOL10Q9BSC4 688 aaKnown RBP21.7■■□□□ 1.06
COL1A2-202ENST00000461525 ZHX2Q9Y6X8 837 aa21.7■■□□□ 1.06
COL1A2-202ENST00000461525 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
COL1A2-202ENST00000461525 SLURP2P0DP57 97 aa21.69■■□□□ 1.06
COL1A2-202ENST00000461525 MOGSQ13724 837 aa21.69■■□□□ 1.06
COL1A2-202ENST00000461525 NAA16Q6N069 864 aaPredicted RBP21.69■■□□□ 1.06
COL1A2-202ENST00000461525 TEX11Q8IYF3 940 aa21.69■■□□□ 1.06
COL1A2-202ENST00000461525 ZNF512BQ96KM6 892 aaPredicted RBP21.69■■□□□ 1.06
COL1A2-202ENST00000461525 DBNLQ9UJU6 430 aaKnown RBP21.69■■□□□ 1.06
COL1A2-202ENST00000461525 TBC1D12O60347 775 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 MS4A1P11836 297 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 C17orf99Q6UX52 265 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 PARK7Q99497 189 aaKnown RBP21.68■■□□□ 1.06
COL1A2-202ENST00000461525 ARHGAP39Q9C0H5 1083 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 OSBPL5Q9H0X9 879 aaPredicted RBP21.68■■□□□ 1.06
COL1A2-202ENST00000461525 CPA4Q9UI42 421 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 PTCH2Q9Y6C5 1203 aa21.68■■□□□ 1.06
COL1A2-202ENST00000461525 COL2A1P02458 1487 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 BAG3O95817 575 aa21.67■■□□□ 1.06
COL1A2-202ENST00000461525 CYP2E1P05181 493 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 FASTKD5Q7L8L6 764 aaKnown RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 SH3RF3Q8TEJ3 882 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 CCDC8Q9H0W5 538 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 TLR7Q9NYK1 1049 aaKnown RBP21.67■■□□□ 1.06
COL1A2-202ENST00000461525 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
COL1A2-202ENST00000461525 DOCK2Q92608 1830 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 A0A0G2JLL6 359 aaPredicted RBP21.66■■□□□ 1.06
COL1A2-202ENST00000461525 PLCG2P16885 1265 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 ZAP70P43403 619 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 SLC9C1Q4G0N8 1177 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 GPAT2Q6NUI2 795 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 PRRT2Q7Z6L0 340 aaPredicted RBP21.66■■□□□ 1.06
COL1A2-202ENST00000461525 EAF2Q96CJ1 260 aaPredicted RBP21.66■■□□□ 1.06
COL1A2-202ENST00000461525 AATFQ9NY61 560 aaKnown RBP eCLIP21.66■■□□□ 1.06
COL1A2-202ENST00000461525 AFG3L2Q9Y4W6 797 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 PDE4DIPQ5VU43 2346 aa21.66■■□□□ 1.06
COL1A2-202ENST00000461525 POTEFA5A3E0 1075 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 FAM196BA6NMK8 535 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 IGSF3O75054 1194 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 GNRH1P01148 92 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 GADL1Q6ZQY3 521 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 NBPF11Q86T75 865 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 ERC1Q8IUD2 1116 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 EXOC6BQ9Y2D4 811 aa21.65■■□□□ 1.06
COL1A2-202ENST00000461525 TRIM75PA6NK02 468 aa21.64■■□□□ 1.05
COL1A2-202ENST00000461525 ECM2O94769 699 aaPredicted RBP21.64■■□□□ 1.05
COL1A2-202ENST00000461525 ZNF333Q96JL9 665 aa21.64■■□□□ 1.05
COL1A2-202ENST00000461525 PIH1D3Q9NQM4 214 aaKnown RBP21.64■■□□□ 1.05
COL1A2-202ENST00000461525 CYP2C8P10632 490 aa21.63■■□□□ 1.05
COL1A2-202ENST00000461525 PRMT2P55345 433 aa21.63■■□□□ 1.05
COL1A2-202ENST00000461525 PPP4CP60510 307 aa21.63■■□□□ 1.05
COL1A2-202ENST00000461525 HSP90AB4PQ58FF6 505 aa21.63■■□□□ 1.05
COL1A2-202ENST00000461525 CCDC84Q86UT8 332 aaPredicted RBP21.63■■□□□ 1.05
COL1A2-202ENST00000461525 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.63■■□□□ 1.05
COL1A2-202ENST00000461525 PSMC4P43686 418 aa21.62■■□□□ 1.05
COL1A2-202ENST00000461525 ADGRA1Q86SQ6 560 aa21.62■■□□□ 1.05
COL1A2-202ENST00000461525 AACSQ86V21 672 aa21.62■■□□□ 1.05
COL1A2-202ENST00000461525 TMEM106CQ9BVX2 250 aa21.62■■□□□ 1.05
COL1A2-202ENST00000461525 DHX36Q9H2U1 1008 aaKnown RBP21.62■■□□□ 1.05
COL1A2-202ENST00000461525 HERC5Q9UII4 1024 aaKnown RBP21.62■■□□□ 1.05
COL1A2-202ENST00000461525 HTTP42858 3142 aa21.62■■□□□ 1.05
COL1A2-202ENST00000461525 IDH1O75874 414 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms