RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 VPS16Q9H269 839 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 JADE2Q9NQC1 790 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 BTBD18B2RXH4 712 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 IRS4O14654 1257 aaPredicted RBP16.44■□□□□ 0.22
NCL-207ENST00000461347 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCL-207ENST00000461347 UBA7P41226 1012 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 MATR3P43243 847 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCL-207ENST00000461347 SLC39A14Q15043 492 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 ARMT1Q9H993 441 aa16.44■□□□□ 0.22
NCL-207ENST00000461347 ZNF532Q9HCE3 1301 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 CCDC194A0A1B0GVG4 234 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 VWA3AA6NCI4 1184 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 SH3TC1Q8TE82 1336 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 MTIF2P46199 727 aaKnown RBP16.43■□□□□ 0.22
NCL-207ENST00000461347 CLCN6P51797 869 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
NCL-207ENST00000461347 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
NCL-207ENST00000461347 ANKRD7Q92527 254 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
NCL-207ENST00000461347 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
NCL-207ENST00000461347 ZNF174Q15697 407 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 LONRF3Q496Y0 759 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 IQCEQ6IPM2 695 aa16.43■□□□□ 0.22
NCL-207ENST00000461347 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
NCL-207ENST00000461347 CAPZA3Q96KX2 299 aa16.42■□□□□ 0.22
NCL-207ENST00000461347 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
NCL-207ENST00000461347 ZHX3Q9H4I2 956 aa16.42■□□□□ 0.22
NCL-207ENST00000461347 SPAG1Q07617 926 aa16.42■□□□□ 0.22
NCL-207ENST00000461347 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
NCL-207ENST00000461347 CERS3Q8IU89 383 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 TERF2Q15554 542 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
NCL-207ENST00000461347 SOGA3Q5TF21 947 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 CNGA4Q8IV77 575 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 DHX40Q8IX18 779 aaKnown RBP16.41■□□□□ 0.22
NCL-207ENST00000461347 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
NCL-207ENST00000461347 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
NCL-207ENST00000461347 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
NCL-207ENST00000461347 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 UBXN1Q04323 297 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 FKBP15Q5T1M5 1219 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
NCL-207ENST00000461347 STAT6P42226 847 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 NOSTRINQ8IVI9 506 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 CTNND2Q9UQB3 1225 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
NCL-207ENST00000461347 PRDM1O75626 825 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 DEXIO95424 95 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 BMP15O95972 392 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 MCM7P33993 719 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 PIP4K2BP78356 416 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 GPR161Q8N6U8 529 aaKnown RBP16.39■□□□□ 0.21
NCL-207ENST00000461347 PLIN2Q99541 437 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 IKBKBO14920 756 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 KRT2P35908 639 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 APOA5Q6Q788 366 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 CEP170BQ9Y4F5 1589 aaPredicted RBP16.39■□□□□ 0.21
NCL-207ENST00000461347 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 MCM3P25205 808 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 CCZ1BP86790 482 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 CCZ1P86791 482 aaPredicted RBP16.39■□□□□ 0.21
NCL-207ENST00000461347 HDXQ7Z353 690 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
NCL-207ENST00000461347 KIAA0754O94854 1291 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 GRAMD1CQ8IYS0 662 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 G3V3G9 751 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 IDEP14735 1019 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
NCL-207ENST00000461347 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
NCL-207ENST00000461347 KRT18P05783 430 aaKnown RBP16.37■□□□□ 0.21
NCL-207ENST00000461347 KRT9P35527 623 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 TAB2Q9NYJ8 693 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 PAFAH1B1P43034 410 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 ARMCX5Q6P1M9 558 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 SLF1Q9BQI6 1058 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 ZNF609O15014 1411 aa16.37■□□□□ 0.21
NCL-207ENST00000461347 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms