RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
HCFC1-204ENST00000461098 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
HCFC1-204ENST00000461098 BMP8BP34820 402 aa14.93□□□□□ -0.02
HCFC1-204ENST00000461098 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
HCFC1-204ENST00000461098 DIS3LQ8TF46 1054 aaKnown RBP14.93□□□□□ -0.02
HCFC1-204ENST00000461098 PAWRQ96IZ0 340 aaKnown RBP14.93□□□□□ -0.02
HCFC1-204ENST00000461098 ZHX2Q9Y6X8 837 aa14.93□□□□□ -0.02
HCFC1-204ENST00000461098 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 CAPN2P17655 700 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 PTPRAP18433 802 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 PRDX5P30044 214 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 GPR153Q6NV75 609 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 SCYL3Q8IZE3 742 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 SLC45A1Q9Y2W3 748 aa14.92□□□□□ -0.02
HCFC1-204ENST00000461098 SPTBN5Q9NRC6 3674 aaKnown RBP14.92□□□□□ -0.02
HCFC1-204ENST00000461098 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
HCFC1-204ENST00000461098 PUM3Q15397 648 aaKnown RBP14.91□□□□□ -0.02
HCFC1-204ENST00000461098 FASTKD5Q7L8L6 764 aaKnown RBP14.91□□□□□ -0.02
HCFC1-204ENST00000461098 WDR66Q8TBY9 1149 aa14.91□□□□□ -0.02
HCFC1-204ENST00000461098 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
HCFC1-204ENST00000461098 RFX7Q2KHR2 1363 aa14.9□□□□□ -0.02
HCFC1-204ENST00000461098 TNPO2O14787 897 aaKnown RBP14.9□□□□□ -0.02
HCFC1-204ENST00000461098 RFX5P48382 616 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-204ENST00000461098 Q7L0L9 218 aa14.9□□□□□ -0.02
HCFC1-204ENST00000461098 DEFB123Q8N688 67 aa14.9□□□□□ -0.02
HCFC1-204ENST00000461098 USP40Q9NVE5 1235 aa14.9□□□□□ -0.02
HCFC1-204ENST00000461098 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-204ENST00000461098 SALL2Q9Y467 1007 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-204ENST00000461098 IFIT1P09914 478 aaKnown RBP14.89□□□□□ -0.03
HCFC1-204ENST00000461098 GADL1Q6ZQY3 521 aa14.89□□□□□ -0.03
HCFC1-204ENST00000461098 NECAB2Q7Z6G3 386 aa14.89□□□□□ -0.03
HCFC1-204ENST00000461098 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
HCFC1-204ENST00000461098 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.89□□□□□ -0.03
HCFC1-204ENST00000461098 LRIT3Q3SXY7 679 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 ATG9AQ7Z3C6 839 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 ANKRD13CQ8N6S4 541 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 LPIN2Q92539 896 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 MTMR10Q9NXD2 777 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 ZMYND8Q9ULU4 1186 aaPredicted RBP14.88□□□□□ -0.03
HCFC1-204ENST00000461098 DOCK1Q14185 1865 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
HCFC1-204ENST00000461098 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
HCFC1-204ENST00000461098 ENTPD3O75355 529 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 RGS3P49796 1198 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 TRIM32Q13049 653 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 TREML2Q5T2D2 321 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
HCFC1-204ENST00000461098 C7orf61Q8IZ16 206 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 ANKLE1Q8NAG6 615 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
HCFC1-204ENST00000461098 PICK1Q9NRD5 415 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 STXBP5LQ9Y2K9 1186 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
HCFC1-204ENST00000461098 DDX60LQ5H9U9 1706 aaKnown RBP14.86□□□□□ -0.03
HCFC1-204ENST00000461098 EYA2O00167 538 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 LDHBP07195 334 aaKnown RBP14.86□□□□□ -0.03
HCFC1-204ENST00000461098 SLC5A1P13866 664 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 SMCR8Q8TEV9 937 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-204ENST00000461098 COA7Q96BR5 231 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 GAKO14976 1311 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
HCFC1-204ENST00000461098 PRUNE2Q8WUY3 3088 aa14.85□□□□□ -0.03
HCFC1-204ENST00000461098 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
HCFC1-204ENST00000461098 CTNND1O60716 968 aaKnown RBP14.85□□□□□ -0.03
HCFC1-204ENST00000461098 SYN1P17600 705 aa14.85□□□□□ -0.03
HCFC1-204ENST00000461098 MAGEA10P43363 369 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-204ENST00000461098 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
HCFC1-204ENST00000461098 CDH23Q9H251 3354 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 LOC285556D6RIA3 1793 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 ZBTB22O15209 634 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-204ENST00000461098 TDHQ8IZJ6 230 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 NBPF3Q9H094 633 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
HCFC1-204ENST00000461098 HMGCRP04035 888 aa14.83□□□□□ -0.04
HCFC1-204ENST00000461098 PHKA1P46020 1223 aa14.83□□□□□ -0.04
HCFC1-204ENST00000461098 MRPL50Q8N5N7 158 aaKnown RBP14.83□□□□□ -0.04
HCFC1-204ENST00000461098 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
HCFC1-204ENST00000461098 COL25A1Q9BXS0 654 aaPredicted RBP14.83□□□□□ -0.04
HCFC1-204ENST00000461098 OGDHLQ9ULD0 1010 aa14.83□□□□□ -0.04
HCFC1-204ENST00000461098 LRRFIP2Q9Y608 721 aaKnown RBP14.83□□□□□ -0.04
HCFC1-204ENST00000461098 PFASO15067 1338 aa14.83□□□□□ -0.04
HCFC1-204ENST00000461098 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
HCFC1-204ENST00000461098 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-204ENST00000461098 TRIB2Q92519 343 aa14.82□□□□□ -0.04
HCFC1-204ENST00000461098 C11orf49Q9H6J7 331 aa14.82□□□□□ -0.04
HCFC1-204ENST00000461098 SEMA3EO15041 775 aa14.81□□□□□ -0.04
HCFC1-204ENST00000461098 TBC1D12O60347 775 aa14.81□□□□□ -0.04
HCFC1-204ENST00000461098 RHBDL3P58872 404 aa14.81□□□□□ -0.04
HCFC1-204ENST00000461098 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
HCFC1-204ENST00000461098 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
HCFC1-204ENST00000461098 ZSCAN29Q8IWY8 852 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-204ENST00000461098 ZNF384Q8TF68 577 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms