RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF112Q9UJU3 913 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 CCDC85CA6NKD9 419 aa23.2■■□□□ 1.3
COL5A1-203ENST00000460264 FKTNO75072 461 aa23.2■■□□□ 1.3
COL5A1-203ENST00000460264 LDHCP07864 332 aa23.2■■□□□ 1.3
COL5A1-203ENST00000460264 SH3BP5LQ7L8J4 393 aa23.2■■□□□ 1.3
COL5A1-203ENST00000460264 FOCADQ5VW36 1801 aa23.19■■□□□ 1.3
COL5A1-203ENST00000460264 CCL15-CCL14A0A0B4J2E2 113 aa23.19■■□□□ 1.3
COL5A1-203ENST00000460264 CYP2E1P05181 493 aaPredicted RBP23.19■■□□□ 1.3
COL5A1-203ENST00000460264 PICALMQ13492 652 aa23.19■■□□□ 1.3
COL5A1-203ENST00000460264 CCL15Q16663 113 aa23.19■■□□□ 1.3
COL5A1-203ENST00000460264 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
COL5A1-203ENST00000460264 CRHR2Q13324 411 aa23.18■■□□□ 1.3
COL5A1-203ENST00000460264 PPIL2Q13356 520 aa23.18■■□□□ 1.3
COL5A1-203ENST00000460264 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
COL5A1-203ENST00000460264 C20orf194Q5TEA3 1177 aa23.18■■□□□ 1.3
COL5A1-203ENST00000460264 ZSCAN29Q8IWY8 852 aaPredicted RBP23.18■■□□□ 1.3
COL5A1-203ENST00000460264 SIRT2Q8IXJ6 389 aa23.18■■□□□ 1.3
COL5A1-203ENST00000460264 RPAP2Q8IXW5 612 aaPredicted RBP23.18■■□□□ 1.3
COL5A1-203ENST00000460264 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 DDTLA6NHG4 134 aaPredicted RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 IRF6O14896 467 aa23.17■■□□□ 1.3
COL5A1-203ENST00000460264 NPM3O75607 178 aaKnown RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 MAP4K4O95819 1239 aaPredicted RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 ZAP70P43403 619 aa23.17■■□□□ 1.3
COL5A1-203ENST00000460264 PDE3AQ14432 1141 aa23.17■■□□□ 1.3
COL5A1-203ENST00000460264 NOL9Q5SY16 702 aaKnown RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 AACSQ86V21 672 aa23.17■■□□□ 1.3
COL5A1-203ENST00000460264 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
COL5A1-203ENST00000460264 HMMRO75330 724 aa23.16■■□□□ 1.3
COL5A1-203ENST00000460264 PPATQ06203 517 aa23.16■■□□□ 1.3
COL5A1-203ENST00000460264 SNAPC2Q13487 334 aa23.16■■□□□ 1.3
COL5A1-203ENST00000460264 NAA16Q6N069 864 aaPredicted RBP23.16■■□□□ 1.3
COL5A1-203ENST00000460264 RHPN1Q8TCX5 695 aa23.16■■□□□ 1.3
COL5A1-203ENST00000460264 PHF20L1A8MW92 1017 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 CETPP11597 493 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 MAP3K10Q02779 954 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 PKN2Q16513 984 aaKnown RBP23.15■■□□□ 1.3
COL5A1-203ENST00000460264 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.15■■□□□ 1.3
COL5A1-203ENST00000460264 IL1RAPL2Q9NP60 686 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 PIH1D3Q9NQM4 214 aaKnown RBP23.15■■□□□ 1.3
COL5A1-203ENST00000460264 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
COL5A1-203ENST00000460264 NOL10Q9BSC4 688 aaKnown RBP23.14■■□□□ 1.29
COL5A1-203ENST00000460264 SIPA1L1O43166 1804 aa23.14■■□□□ 1.29
COL5A1-203ENST00000460264 ATAD5Q96QE3 1844 aa23.14■■□□□ 1.29
COL5A1-203ENST00000460264 PTPRFP10586 1907 aa23.14■■□□□ 1.29
COL5A1-203ENST00000460264 IGSF3O75054 1194 aa23.13■■□□□ 1.29
COL5A1-203ENST00000460264 TAF1CQ15572 869 aaPredicted RBP23.13■■□□□ 1.29
COL5A1-203ENST00000460264 ADGRA1Q86SQ6 560 aa23.13■■□□□ 1.29
COL5A1-203ENST00000460264 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
COL5A1-203ENST00000460264 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
COL5A1-203ENST00000460264 APBB1O00213 710 aa23.12■■□□□ 1.29
COL5A1-203ENST00000460264 SLURP2P0DP57 97 aa23.12■■□□□ 1.29
COL5A1-203ENST00000460264 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
COL5A1-203ENST00000460264 OSBPL5Q9H0X9 879 aaPredicted RBP23.12■■□□□ 1.29
COL5A1-203ENST00000460264 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL5A1-203ENST00000460264 KCNH4Q9UQ05 1017 aa23.12■■□□□ 1.29
COL5A1-203ENST00000460264 BTBD19C9JJ37 291 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 BAG3O95817 575 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 PLCG2P16885 1265 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 SCYL3Q8IZE3 742 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
COL5A1-203ENST00000460264 HPS5Q9UPZ3 1129 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 NDUFB9Q9Y6M9 179 aa23.11■■□□□ 1.29
COL5A1-203ENST00000460264 PPP4CP60510 307 aa23.1■■□□□ 1.29
COL5A1-203ENST00000460264 FBXO46Q6PJ61 603 aaPredicted RBP23.1■■□□□ 1.29
COL5A1-203ENST00000460264 CLASRPQ8N2M8 674 aaKnown RBP23.1■■□□□ 1.29
COL5A1-203ENST00000460264 ERO1AQ96HE7 468 aa23.1■■□□□ 1.29
COL5A1-203ENST00000460264 ZFYVE28Q9HCC9 887 aa23.1■■□□□ 1.29
COL5A1-203ENST00000460264 TBC1D12O60347 775 aa23.09■■□□□ 1.29
COL5A1-203ENST00000460264 IDH1O75874 414 aaKnown RBP23.09■■□□□ 1.29
COL5A1-203ENST00000460264 CD99L2Q8TCZ2 262 aa23.09■■□□□ 1.29
COL5A1-203ENST00000460264 PICK1Q9NRD5 415 aa23.09■■□□□ 1.29
COL5A1-203ENST00000460264 HTTP42858 3142 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
COL5A1-203ENST00000460264 RAB11FIP3O75154 756 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 PTPRAP18433 802 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 SP3Q02447 781 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 OTOP1Q7RTM1 612 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 ANTXR1Q9H6X2 564 aa23.08■■□□□ 1.29
COL5A1-203ENST00000460264 CYP7A1P22680 504 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 MOGSQ13724 837 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 ANKRD23Q86SG2 305 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL5A1-203ENST00000460264 TRIM17Q9Y577 477 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 ZHX2Q9Y6X8 837 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 MYH1P12882 1939 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 ZSWIM8A7E2V4 1837 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 FLT1P17948 1338 aa23.07■■□□□ 1.28
COL5A1-203ENST00000460264 CXCL11O14625 94 aa23.06■■□□□ 1.28
COL5A1-203ENST00000460264 IFIT2P09913 472 aaKnown RBP23.06■■□□□ 1.28
COL5A1-203ENST00000460264 RGS19P49795 217 aa23.06■■□□□ 1.28
COL5A1-203ENST00000460264 MAGEB6Q8N7X4 407 aa23.06■■□□□ 1.28
COL5A1-203ENST00000460264 TGFBRAP1Q8WUH2 860 aa23.06■■□□□ 1.28
COL5A1-203ENST00000460264 TLR2O60603 784 aa23.05■■□□□ 1.28
COL5A1-203ENST00000460264 CAP1Q01518 475 aa23.05■■□□□ 1.28
COL5A1-203ENST00000460264 MAP3K12Q12852 859 aa23.05■■□□□ 1.28
COL5A1-203ENST00000460264 DYNLL1P63167 89 aaKnown RBP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 TMED8Q6PL24 325 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms