RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 CEP350Q5VT06 3117 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 M0R2C6 588 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 ENTPD3O75355 529 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 PLCG2P16885 1265 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 MOB2Q70IA6 237 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 SH3BP5LQ7L8J4 393 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 FAM151AQ8WW52 585 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 APPBP2Q92624 585 aa15.49■□□□□ 0.07
COL18A1-206ENST00000459895 PUS7LQ9H0K6 701 aaKnown RBP15.49■□□□□ 0.07
COL18A1-206ENST00000459895 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-206ENST00000459895 GBA2Q9HCG7 927 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-206ENST00000459895 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
COL18A1-206ENST00000459895 ZFYP08048 801 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-206ENST00000459895 PRKG1Q13976 671 aa15.48■□□□□ 0.07
COL18A1-206ENST00000459895 TGFBRAP1Q8WUH2 860 aa15.48■□□□□ 0.07
COL18A1-206ENST00000459895 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
COL18A1-206ENST00000459895 ABT1Q9ULW3 272 aaKnown RBP15.48■□□□□ 0.07
COL18A1-206ENST00000459895 TLL2Q9Y6L7 1015 aa15.48■□□□□ 0.07
COL18A1-206ENST00000459895 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 A0A0D9SFI3 127 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 DDTLA6NHG4 134 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-206ENST00000459895 NF2P35240 595 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 SLC4A8Q2Y0W8 1093 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 CERS3Q8IU89 383 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 SDR42E1Q8WUS8 393 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 RILPL2Q969X0 211 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 CSRNP1Q96S65 589 aa15.47■□□□□ 0.07
COL18A1-206ENST00000459895 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
COL18A1-206ENST00000459895 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
COL18A1-206ENST00000459895 SLURP2P0DP57 97 aa15.46■□□□□ 0.07
COL18A1-206ENST00000459895 ZMYM1Q5SVZ6 1142 aa15.46■□□□□ 0.07
COL18A1-206ENST00000459895 SAPCD2Q86UD0 394 aa15.46■□□□□ 0.07
COL18A1-206ENST00000459895 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
COL18A1-206ENST00000459895 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
COL18A1-206ENST00000459895 SAP30BPQ9UHR5 308 aaKnown RBP15.46■□□□□ 0.07
COL18A1-206ENST00000459895 GPAA1O43292 621 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 PRKAB2O43741 272 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 SDSP20132 328 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 USP5P45974 858 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 HUNKP57058 714 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-206ENST00000459895 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
COL18A1-206ENST00000459895 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 ZSCAN29Q8IWY8 852 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-206ENST00000459895 FAM227BQ96M60 508 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 PTPRFP10586 1907 aa15.45■□□□□ 0.06
COL18A1-206ENST00000459895 RASSF10A6NK89 507 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 FAM196BA6NMK8 535 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 FKBP1BP68106 108 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 EVX2Q03828 476 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-206ENST00000459895 SUPT20HL1Q3ZLR7 823 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 C2orf69Q8N8R5 385 aa15.44■□□□□ 0.06
COL18A1-206ENST00000459895 EPB41L4AQ9HCS5 686 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-206ENST00000459895 MKRN1Q9UHC7 482 aaKnown RBP15.44■□□□□ 0.06
COL18A1-206ENST00000459895 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
COL18A1-206ENST00000459895 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-206ENST00000459895 MAP3K11Q16584 847 aa15.43■□□□□ 0.06
COL18A1-206ENST00000459895 ZNF589Q86UQ0 364 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-206ENST00000459895 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
COL18A1-206ENST00000459895 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-206ENST00000459895 PALD1Q9ULE6 856 aa15.43■□□□□ 0.06
COL18A1-206ENST00000459895 LOC285556D6RIA3 1793 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 UBE2Q2LH0YL09 131 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 FOXP2O15409 715 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 MIGA2Q7L4E1 593 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 RASAL3Q86YV0 1011 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.063e-12■□□□□ 9.7
COL18A1-206ENST00000459895 CLMNQ96JQ2 1002 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 STRBPQ96SI9 672 aaKnown RBP15.42■□□□□ 0.06
COL18A1-206ENST00000459895 IL25Q9H293 177 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 DIAPH3Q9NSV4 1193 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 SLC4A4Q9Y6R1 1079 aa15.42■□□□□ 0.06
COL18A1-206ENST00000459895 ROBO3Q96MS0 1386 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 PPP1R12BO60237 982 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-206ENST00000459895 USP2O75604 605 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-206ENST00000459895 CYP2D6P10635 497 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 VGLL4Q14135 290 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-206ENST00000459895 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
COL18A1-206ENST00000459895 CYP2D7A0A087X1C5 515 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
COL18A1-206ENST00000459895 GRM1Q13255 1194 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 VPS53Q5VIR6 699 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 HHIPL1Q96JK4 782 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 DHX36Q9H2U1 1008 aaKnown RBP15.4■□□□□ 0.06
COL18A1-206ENST00000459895 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms